Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1246 ATGGTTTTCTCTTCTATTCCAGTCTATTTAGATCCTCCCAATTGGCAGCAGGAGCAACAGAACTATCTTCAAACAAATGAGACCAGTGAGCTTCCACCTCTGCCTCTACAAGCCCCTCATATGGTCTCAATCAGGCCTGGATCGATGGCGGATCGAGCCCGGCTAGCGAAGTTACCGCCGCCGGAGGCAGCTCTAAAGTGTCCTCGCTGTGAATCTACCAACACAAAATTCTGCTACTTTAACAACTACAGCTTGTCTCAGCCCAGGCACTTCTGCAAGGCATGTAGGCGTTACTGGACAAGAGGCGGCGCTCTCAGGAACGTTCCGGTTGGCGGAGGATGCCGCAGAAACAAGAAGATCAAGAGAAGCCGCTCCAAGTCTCCGGCAGCATCTGTCAAACAGCCAACGTCCGACGCCACAGGCGGGGCCGCCATAGCCACGGAGCTGATTGGTCAATTGCCGTCCCAAGCATCAAATTTACCATTCATGGCTTCCTTACAGGATCTGAGTCGCTATGGTGTGGGAAGCATGGGCCTAAGCTTGCAAGGACAGAGTGATCACATGTTTCCCATTGGACTTAATTCTAGCGGAGGATTGGATCAGTGGCGATTAAAGCAGTTTCCTTTCTGGAATAATGGTTTTGATCAATCAAGTTCAGGTGCTTCTGCTTCTGCCGCTTCATCAAACCCATTTCAAATCGAACTTGGGAGTTCTAGGGTTATGCAAGTGCCTCCAGTTAAAATGGAAGACAATAATGGAGCCCTAAATTTTTCTAGGTCATCGCAAGCTCCGAGTATATCAGAAAATAACAACCAATTATACTATTCATGGACTCCTACCACTGATATTATATCAGGCCTTGCCTCTTCTTCCACGACCCATGTCCTGTAA 891 0.486 MVFSSIPVYLDPPNWQQEQQNYLQTNETSELPPLPLQAPHMVSIRPGSMADRARLAKLPPPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNKKIKRSRSKSPAASVKQPTSDATGGAAIATELIGQLPSQASNLPFMASLQDLSRYGVGSMGLSLQGQSDHMFPIGLNSSGGLDQWRLKQFPFWNNGFDQSSSGASASAASSNPFQIELGSSRVMQVPPVKMEDNNGALNFSRSSQAPSISENNNQLYYSWTPTTDIISGLASSSTTHVL 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1246 296 MobiDBLite consensus disorder prediction 115 139 - -
Lele11g1246 296 Pfam Dof domain, zinc finger 64 119 IPR003851 GO:0003677|GO:0006355
Lele11g1246 296 ProSiteProfiles Zinc finger Dof-type profile. 65 119 IPR003851 GO:0003677|GO:0006355
Lele11g1246 296 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 46 216 IPR045174 GO:0003700|GO:0006355
Lele11g1246 296 ProSitePatterns Zinc finger Dof-type signature. 67 103 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1246 Lele-ChrLele11 19478330 19479398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1246 45 295 C2C2-Dof Transcription Factor Family AT3G55370 43.431 2.83e-55 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele11g1246 zf-Dof 5.1e-33 No_clan