Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1219 ATGGTTTTCTCTTCTATTCCAGTCTATTTAGATCCTCCCAATTGGCAGCAGCAACAAAATTATCTTCAAACAAATGAGACCAGTGAGCTTCCACCTCTGCCTCCACAAGCCCCTCATATGGGATCAATCAGGCCTGGATCGATGGCGGATCGAGCCCGGCTAGCGAAGATACCGCCGCTGGAGGCAGCTCTAAAGTGTCCTCGCTGTGAATCTACCAACACAAAATTCTGCTACTTTAACAACTACAGCTTGTCTCAACCCAGGCACTTCTGCAAGACCTGTAGGCGTTACTGGACAAGAGGCGGCGCTCTCAGGAACGTTCCTGTTGGGGGAGGATGCCGCAGAAACAAGAAGACCAAGAGAAGCCGCTTCAAGTCTCCGGCAGCATCTGACAAACAGCCACCGTCCGACCCCACAGGCGGGGCAGCCATAGCCACCGAGCTGATAGGTCAATTGCCATCCCAAGCATCAAATTTACCATTCATGGCGTCCTTTCAGGATCTGAGTCGCTATGGAGTGGGAAGCATGGGCCTCAGCTTGCAAGGACAGAGTGATCACATGTTTCCCATTGGACTTAATGGAAGCAATATTCCAAGAGGAGGACTGGATCAGTGGCGGTTAAAGCAGTTTCCTTTCTTGAATAATGGTTTTGATCAGTCACGTTCAGCTGTTTCTGCTTCTTCTTCAAACCCATTTCAAATCGAACTTGGGAGTTCTAGGGTTACGCAAATGCCTCCAGTTAAAATGGAAGATAATAATGGAGCCCTAAATTTGTCTAGGGCATCGCAAGCTCCGAGTATATCAGAAAATAACAACCAATGCTATTCATGGACTCCTACCACAGATATTATATCAGGCCTTGTTGCCTCTTCATTCACGACCCATGTCTTGTAA 894 0.481 MVFSSIPVYLDPPNWQQQQNYLQTNETSELPPLPPQAPHMGSIRPGSMADRARLAKIPPLEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKTKRSRFKSPAASDKQPPSDPTGGAAIATELIGQLPSQASNLPFMASFQDLSRYGVGSMGLSLQGQSDHMFPIGLNGSNIPRGGLDQWRLKQFPFLNNGFDQSRSAVSASSSNPFQIELGSSRVTQMPPVKMEDNNGALNLSRASQAPSISENNNQCYSWTPTTDIISGLVASSFTTHVL 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1219 297 MobiDBLite consensus disorder prediction 109 141 - -
Lele10g1219 297 Pfam Dof domain, zinc finger 63 118 IPR003851 GO:0003677|GO:0006355
Lele10g1219 297 ProSitePatterns Zinc finger Dof-type signature. 66 102 IPR003851 GO:0003677|GO:0006355
Lele10g1219 297 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 38 216 IPR045174 GO:0003700|GO:0006355
Lele10g1219 297 ProSiteProfiles Zinc finger Dof-type profile. 64 118 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1219 Lele-ChrLele10 23309793 23310858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g1219 34 260 C2C2-Dof Transcription Factor Family AT3G55370 45.635 2.66e-52 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele10g1219 zf-Dof 1.3e-32 No_clan