Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2478 ATGATTAAGATGGTGGATCAGAGAAAGAGAGTAATAATTACACGTTGTTGCCCTAGTTATAATAAACTCATAAGCATCGTTAATGTGGTGTGTTTCGTTGTGCTGATTCTGTTGATCTCCGGGACCATCAAGCTCCCTCCGTCCATGTATTTCTATTCATTACCTTCATTCACCATCTTCAACAACGACACTTCTAGATGGTCCGATGTTCATCATCACGACGCTCATGGCTTCACGGATCTTCTCGAGGCCTTCAAGGAGTGGGATGCTCAAGTGGGCTGTGAGGAGTTTAAGAAGAAACTGCAGAATTATACAGATGCGTTGAATGGTTCTTCTTCTTCCTCTTCATTCAAAGAAGAGATTAATGGTGGAGTGTGTGAGGGTTTAAAGATGAAGCATGTGAGTGTTTTGGTGAAAGGGCCAACGTGGATTCCTGATAATTTGGATAACTTGTACTCTTGTCCATGTGGTTTGAGCTGCTTGTGGACTAAATCTCCTGTTCTTGCTGATAAACCTGATGCTCTCTTGTTTGAAAACACTAAGCCTCCACTTCGGAGGAAGGCTGGAGAAGCAGTAAGGGTATATATGGATCTGGAACCAGACAGAAAAAGAACAGGTCGTGAGGACATATTCATCAGTTATCATGCTGACGATGATATCCAGACCACCTATGCTGGTGCCTTCTTCCACAACAGTCGAAACTACCACATTTCCTCTCACAAGAACTCTGGCCCACTTGTGTACTGGTCATCGTCCCACTGTGTATCCAAAAGAAACAAGAAAGCTCAAAAGCTTCTCTCCATGTTGCCTCACCATTCCTTCGGAAAGTGTCTCAACAACGTTAATGGCAGAAACAAGGCTCTCTCCTTGTACCCTCACTGTGCTCAATCTTCTTCTCCAAGATGGTGGGACCACCTTCACTGTGCCATGTCCCACTACAAGTTCGTCCTCGCCATAGAAAACACCTGGACTCACAGCTACGTCACCGAGAAGCTCTTCTACGCCTTGGACTCCGCCGCCGTCCCCATCTACTTCGGAGCTCCCAACGTCGACGAGTTCGTGCCGCCTCATTCTGTCATCGACGGCTCCAAGTTCAGCAGCTTGCAAGATTTGGCTTTGTACGTTAAGGCATTGGCTAATGACTCTGTAGCTTATGCTGAATATCATGCTTGGAGAAGATGTGGGGTGTTGGGCAATTATGGGAGAACCAGAGGACTTAGCCTTGACTCGTTGCCTTGTAGGCTCTGTGAACTTGTTAGCAAAAAAGGAGGAAGAAATGCAGAGTCCAATTGA 1293 0.4594 MIKMVDQRKRVIITRCCPSYNKLISIVNVVCFVVLILLISGTIKLPPSMYFYSLPSFTIFNNDTSRWSDVHHHDAHGFTDLLEAFKEWDAQVGCEEFKKKLQNYTDALNGSSSSSSFKEEINGGVCEGLKMKHVSVLVKGPTWIPDNLDNLYSCPCGLSCLWTKSPVLADKPDALLFENTKPPLRRKAGEAVRVYMDLEPDRKRTGREDIFISYHADDDIQTTYAGAFFHNSRNYHISSHKNSGPLVYWSSSHCVSKRNKKAQKLLSMLPHHSFGKCLNNVNGRNKALSLYPHCAQSSSPRWWDHLHCAMSHYKFVLAIENTWTHSYVTEKLFYALDSAAVPIYFGAPNVDEFVPPHSVIDGSKFSSLQDLALYVKALANDSVAYAEYHAWRRCGVLGNYGRTRGLSLDSLPCRLCELVSKKGGRNAESN 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2478 430 Gene3D - 195 396 IPR038577 -
Lele08g2478 430 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 246 422 IPR001503 GO:0006486|GO:0008417|GO:0016020
Lele08g2478 430 FunFam Alpha-(1,4)-fucosyltransferase 193 397 - -
Lele08g2478 430 PIRSF FucT_plant 16 430 IPR017177 -
Lele08g2478 430 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 124 422 - -
Lele08g2478 430 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 131 421 IPR001503 GO:0006486|GO:0008417|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2478 Lele-ChrLele08 30465399 30469368 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2478 20 427 Xyloglucan Fucosyltransferase1 AT1G71990 59.512 1.27e-180 508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g2560 05 41348495 41352182 Lele08g2478 08 30465399 30469368 hybridization
Lele06g2541 06 33170682 33174114 Lele08g2478 08 30465399 30469368 hybridization