Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1044 ATGATGGAGAGAGGGTGGAAGCATAATAATACTGAGATATCACCTAATTGTCCCAGGTGTGGCTCTCGCAACACCAAGTTCTGCTATTACAACAACTACAGCTTAACTCAACCTCGCTACTTTTGCAAAGCCTGCAGAAGGTACTGGACCAAAGGAGGATCCCTCCGCAAAGTCCCTGTCGGCGGTGGCTGCCGGAAAACCAGGCGCCATACTAGTAAGACCTTAAGAGTACACTCAGCCTTGCTTAATGCCCATCCCTCGACTGTTTCATCTTCAAGCTCCTCATCACCGCCGGCGTCTGATCATGCTCCACATATTGATCTTGCCCTGATTTATGCCAATTTTCTCAATCAAAACCCAGGTTCAAGCGATCAGGAGCCACATCATCATCATCAATTCATGAAAACACTAGGTTTTGATCCTTGCGTAGAGTATTCGAGTCTGTCCGACGTAGTTTTTGGTCTTTCTGAACCATCCACAATAATAGGATCCCATTTCAATGTTGTTGGTGGTTATCATCATCTGGGTGGGTTATTCAACTCCATGCAAGAGCATCATAAGGAAGACAGAATAATTGGTAGTAGCGATTTTGAGCTGCCGCCATTACCAGGTGAAGAGGTGGCCTCGCAATATGATATGATGATGTGGTCCTCCGAAGAATCTCATCATGATGAGATGATGGTCGTAAACCAGGCGCCACTTGGAACTCGACCTCATCATGTCAATGGTAATTGGGGACCCTTTCATTACTCGACCAATGTTTCTTTTCCCAGCCTTTGA 780 0.4603 MMERGWKHNNTEISPNCPRCGSRNTKFCYYNNYSLTQPRYFCKACRRYWTKGGSLRKVPVGGGCRKTRRHTSKTLRVHSALLNAHPSTVSSSSSSSPPASDHAPHIDLALIYANFLNQNPGSSDQEPHHHHQFMKTLGFDPCVEYSSLSDVVFGLSEPSTIIGSHFNVVGGYHHLGGLFNSMQEHHKEDRIIGSSDFELPPLPGEEVASQYDMMMWSSEESHHDEMMVVNQAPLGTRPHHVNGNWGPFHYSTNVSFPSL 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1044 259 Pfam Dof domain, zinc finger 16 69 IPR003851 GO:0003677|GO:0006355
Lele07g1044 259 ProSiteProfiles Zinc finger Dof-type profile. 15 69 IPR003851 GO:0003677|GO:0006355
Lele07g1044 259 ProSitePatterns Zinc finger Dof-type signature. 17 53 IPR003851 GO:0003677|GO:0006355
Lele07g1044 259 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 12 146 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1044 Lele-ChrLele07 6292353 6293132 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1044 6 217 C2C2-Dof Transcription Factor Family AT3G52440 44.444 1.75e-43 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele07g1044 zf-Dof 1.3e-30 No_clan