Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2541 ATGTATTTCTATTCATTACCTTCATTCACCATCTTCAACAACGATACTTCTAGATGGTTTGATATTCATCATCACGACGCTGATGGCTTCACGGATCTTCTCGAGGCCTTCAAGGAGTGGGATGCTCAAGTGGGCTGTGAGGAGTTTAAGAAGAAGCTGCAGAATTATACAGATGCGTTGAATGGTTCTTCTTCTTCATTCAAAGAAGAGATTAATGGTGGAGTGTGTGAGGGTTTAAAGATGAAGCATGTGAGTGTTTTGGTGAAAGGGCCAACGTGGATTCCTGATAATTTAGATAACTTGTACTCTTGTCCATGTGGTTTGAGCTGCTTGTGGACTAAATCTCCTGTTCTTGCTGATAAACCTGATGCTTTCTTGTTTGAAAGCACTAAGCCTCCACTTCGGAGGAAGGCTGGAGAAGCAGTGAGGGTATATATGGATCTGGAACCAGACAGAAAAAGAACAGGTCGTGAGGACATATTCATCAGTTATCATGCTGAAGATGATATCCAGACCACCTATGCTGGTGCCTTCTTCCACAACAGTCGAAACTACCAAATTTCCTCTCACAAGAACTCTGGCCCACTTGTGTACTGGTCATCGTCCCACTGTGTATCCAAAAGAAACAAGAAAGCTCAAAAGCTTCTCTCAATGTTGCCTCACCATTCCTTCGGAAAGTGTCTCAACAACGTTAATGGCAGAAACAAGGCTCTCTCCTTCTACCCTCACTGTGCTCAATCTTCTTCCCCAAGATGGTGGGACCAGCTTCACTGTGCCATGTCCCACTACAAGTTCGTCCTCGCCATAGAAAACACCTGGACTCACAGCTACGTCACCGAGAAGCTCTTCTACGCCTTGGACTCCGCCGCCGTCCCCATCTACTTCGGAGCTCCCAACGTCGACGACTTCGTGCGCCTCATTCCGTCATCGACGGCTCCAACTTCAGCAGCTTGCAAGATTTGGCTTTGTACGTTAAGGCATTGGCTAATGACTCTGTGGCTTATGCTGAATATCATGCTTGGAGAAGATGTGGTGTGTTGGGCAATTATGGGAGAACCAGAGGACTTAGCCTTGACTCGTTGCCTTGTAGGCTCTGTGAACTTGTTAGCAGAAAAGGAGGAAGAAATGCAGAGTTCAATTGAGAGATTGCTTCTTATAAATCTCTTTGTAAAGGGACACAGTACTTACCACTTAGACATGGCTTTAACAAATAGGTAA 1218 0.4532 MYFYSLPSFTIFNNDTSRWFDIHHHDADGFTDLLEAFKEWDAQVGCEEFKKKLQNYTDALNGSSSSFKEEINGGVCEGLKMKHVSVLVKGPTWIPDNLDNLYSCPCGLSCLWTKSPVLADKPDAFLFESTKPPLRRKAGEAVRVYMDLEPDRKRTGREDIFISYHAEDDIQTTYAGAFFHNSRNYQISSHKNSGPLVYWSSSHCVSKRNKKAQKLLSMLPHHSFGKCLNNVNGRNKALSFYPHCAQSSSPRWWDQLHCAMSHYKFVLAIENTWTHSYVTEKLFYALDSAAVPIYFGAPNVDDFVRLIPSSTAPTSAACKIWLCTLRHWLMTLWLMLNIMLGEDVVCWAIMGEPEDLALTRCLVGSVNLLAEKEEEMQSSIERLLLINLFVKGHSTYHLDMALTNR 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2541 405 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 75 304 - -
Lele06g2541 405 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 196 308 IPR001503 GO:0006486|GO:0008417|GO:0016020
Lele06g2541 405 FunFam Alpha-(1,4)-fucosyltransferase 143 318 - -
Lele06g2541 405 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 81 304 IPR001503 GO:0006486|GO:0008417|GO:0016020
Lele06g2541 405 Gene3D - 145 315 IPR038577 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2541 Lele-ChrLele06 33170682 33174114 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2541 27 304 Xyloglucan Fucosyltransferase1 AT1G71990 64.643 1.82e-130 379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g2541 06 33170682 33174114 Lele07g2576 07 31153084 31157380 hybridization
Lele06g2541 06 33170682 33174114 Lele08g2478 08 30465399 30469368 hybridization