Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2560 ATGCATGAACGCACACGAGCTCGGTGCCTCAAATCGCCATCGACGCGTGTGTCATCTTCTCCAATTTCTGCATGCTTCAATTCTTCATCAACACATCAAAGAAAGAGAGTGATTACACGTTGTTGCCCTAGTTATAATAAACTCATAAGCATCCTCAATGTGGTGTGTTTCGTTGTGCTGATTCTGTTGATCTCCGGGACGATCGAGCTCCCTTCGTCGATATATTTCTATTCATTACCTTCAGTCGCCATCTTCAACAACGACACTTCAAGATGGTCTGATATTCATCACGACGCTCATGGCTTCACCGATCTGCTAGAAGCCTTTAAGGAGTGGGATGCTCAAGTGGGCTGTGAGGGGTTTAAGAAGAAACTGCAGAATTATACGAGTAATATGAATGGTTCTTCTTCTTTATCTTCTTTCAAAGAAGAGATTCATGGAGGAGTGTGTGAGGGTTTAAAGATGAAGCATGTGAGTGTTTTGGTGAAAGGGCCAACGTGGATTCCTGATAATTTGGATAACTTGTACTCTTGTCCATGTGGTTTGAGCTGCTTGTGGACTAAATCTCCTGTTCTTGCTGATAAACCTGATGCTCTCTTGTTTGAAAACACTAAGCCTCCACTTCGGAGGAAGGTGGGAGAACCAGTAAGGGTATATATGGATCTGGAACCAGACAGAAAAAGAACAGGTCGTGAGAACATTTTCATCAGTTATCATGCTGACGATGATATCCAGACAACCTATGCCGGTGCCTTCTTCCATAACAACCGAAACTACCACGTTTCCTCTCACAAGAACACTGGCCCACTTGTGTACTGGTCATCGTCGCACTGTGTATCAAAAAGAAACAAGATAGCTCAAAAGCTGCTTTCCATGTTGCCTCACCATTCCTTCGGGAAATGTCTCAACAACGTTAATGGCAGAAACAAGGCTCTCTCCTTCTACCCTCACTGTGCTCAATCTTCTTCCCCAAGATGGTGGGACCACCTTCACTGTGCCATGTCCCACTACAAGTTCGTCCTCGCCATAGAAAACACCTGGACTCACAGCTACGTCACAGAGAAGCTCTTCTACGCCTTGGACTCCACCGCCGTCCCCATCTACTTCGGAGCTCCCAACGTGGACGACTTCGTGCCGCCTCATTCCGTCATCGATGGCTCCAAGTTCAGCAGCCTCGAAGATTTGGCTTTGTACGTGAAAGCTTTGGCCAATGACTCTGTAGCTTACGCTGAATATCATGCTTGGAGAAGATGTGGTGTGTTGGGTAATTATGGTAGAACCAGAGGACTGAGTCTTGACTCGTTGCCTTGTAGGCTCTGTGAACTTGTTAGCAGAAAAGGAGGAAGAAATGCAGAGTCCAATTGA 1365 0.4593 MHERTRARCLKSPSTRVSSSPISACFNSSSTHQRKRVITRCCPSYNKLISILNVVCFVVLILLISGTIELPSSIYFYSLPSVAIFNNDTSRWSDIHHDAHGFTDLLEAFKEWDAQVGCEGFKKKLQNYTSNMNGSSSLSSFKEEIHGGVCEGLKMKHVSVLVKGPTWIPDNLDNLYSCPCGLSCLWTKSPVLADKPDALLFENTKPPLRRKVGEPVRVYMDLEPDRKRTGRENIFISYHADDDIQTTYAGAFFHNNRNYHVSSHKNTGPLVYWSSSHCVSKRNKIAQKLLSMLPHHSFGKCLNNVNGRNKALSFYPHCAQSSSPRWWDHLHCAMSHYKFVLAIENTWTHSYVTEKLFYALDSTAVPIYFGAPNVDDFVPPHSVIDGSKFSSLEDLALYVKALANDSVAYAEYHAWRRCGVLGNYGRTRGLSLDSLPCRLCELVSRKGGRNAESN 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2560 454 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 143 445 IPR001503 GO:0006486|GO:0008417|GO:0016020
Lele05g2560 454 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 148 446 - -
Lele05g2560 454 FunFam Alpha-(1,4)-fucosyltransferase 217 421 - -
Lele05g2560 454 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 270 446 IPR001503 GO:0006486|GO:0008417|GO:0016020
Lele05g2560 454 Gene3D - 218 420 IPR038577 -
Lele05g2560 454 PIRSF FucT_plant 41 454 IPR017177 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2560 Lele-ChrLele05 41348495 41352182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2560 45 451 Xyloglucan Fucosyltransferase1 AT1G71990 60.636 0.0 512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g2560 05 41348495 41352182 Lele07g2576 07 31153084 31157380 hybridization
Lele05g2560 05 41348495 41352182 Lele08g2478 08 30465399 30469368 hybridization