Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0720 ATGTCGGCCAACGATCCCGGTTTCATACTCTTCGGCCAAAAGATGTCCTCCTCCTCGCCATCTCAGATTCCGGCCGCCTCCATCTCTCCTCCCGAGCATGATTGGAGTAGCTCAAAGAAATTAGAAGTGGGAATGCCTTCTATAGAAAACTCCGAACAACGAGATTTGCAGAACAATGAGCCAACAAAGATAAGCAGTGCGGAAGAATTTAAAATGATGAAGAAACCAGACAAGATTCAACAGTGTCCACGATGTAACAGTATGGACACAAAGTTCTGTTATTTCAATAACTACAACGTGAACCAACCTCGACATTTCTGCAAGAGCTGCCACAGATATTGGACTGCTGGTGGAGCAATGAGAAATGTCCCAGTAGGCGCAGGAAGACGAAGGAACAGGCAACTATCCTCGCCATACCATCGCCACACTGCAGTATCCGCCGAAGGCATTCCAGTTCCAACCCCAGAGACAGACCCATCTCCTCACCAACGTTTCTCAACTCTTGAATCCTCATCTGCTTTCAAGTCAGCGCCAGCAGATAATACGAGTACCGTGTTGAGATTTGGTCCAGATGCCCCTGTTTCTGAAACTGCGAGTTCAATTCTGAATCTTGGTAATAGGGAGGAGGCATCCGAGTGTGGATCTTCAGTGACAAATGCTGGTGGTGCTCGGGGAAATGAAGTATCAGAACTTGCAATGCAATGGAACAGAGGTGTGTCCAATCTGATGAATACATCAAATGGTGTGCGATGTTATCCTGCTGCACCATGGGTGTTTCCAGCCCAGTGGTATGCTGACAATCAGATTGGCTCATCACCAAACATTCCTGTACAATTTGTGGCAGCTCCATGTTGGAATAATGGGACCGTCTGCTCTGCAGCAGGAACCGGAACAGTTTCAATTGGCTCTAATGGCTACCTCTCCTCCTCATCCTCAACCAGTAATGGCTTAGGAAAACACTGA 963 0.4746 MSANDPGFILFGQKMSSSSPSQIPAASISPPEHDWSSSKKLEVGMPSIENSEQRDLQNNEPTKISSAEEFKMMKKPDKIQQCPRCNSMDTKFCYFNNYNVNQPRHFCKSCHRYWTAGGAMRNVPVGAGRRRNRQLSSPYHRHTAVSAEGIPVPTPETDPSPHQRFSTLESSSAFKSAPADNTSTVLRFGPDAPVSETASSILNLGNREEASECGSSVTNAGGARGNEVSELAMQWNRGVSNLMNTSNGVRCYPAAPWVFPAQWYADNQIGSSPNIPVQFVAAPCWNNGTVCSAAGTGTVSIGSNGYLSSSSSTSNGLGKH 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0720 320 MobiDBLite consensus disorder prediction 11 34 - -
Lele05g0720 320 ProSitePatterns Zinc finger Dof-type signature. 82 118 IPR003851 GO:0003677|GO:0006355
Lele05g0720 320 MobiDBLite consensus disorder prediction 1 60 - -
Lele05g0720 320 Pfam Dof domain, zinc finger 77 134 IPR003851 GO:0003677|GO:0006355
Lele05g0720 320 ProSiteProfiles Zinc finger Dof-type profile. 80 134 IPR003851 GO:0003677|GO:0006355
Lele05g0720 320 PANTHER CYCLIC DOF FACTOR 2 4 320 IPR045174 GO:0003700|GO:0006355
Lele05g0720 320 MobiDBLite consensus disorder prediction 159 181 - -
Lele05g0720 320 MobiDBLite consensus disorder prediction 149 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0720 Lele-ChrLele05 4243476 4245235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0720 57 263 C2C2-Dof Transcription Factor Family AT5G39660 39.423 1.07e-38 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele05g0720 zf-Dof 2.9e-31 No_clan