Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0319 ATGCCTGCTTCTCTGGCTGTTTCTTGTTCCAGCATGCAATGTAAAAGAAGCAATCTCATGCTCGGAAATGTTACAGCGCAACAGAATAGTGGTGGTTGCAGTATTAATTCTTGCAATTATGATGGTTTTGCTAATGGCACTATAATAACAGCATTGTCTACATCTCTTCAACCTCGATGCCCAGGGCCGCAGCAATTTCCTCCACTCGCAGCACCGCCTACTACTGTTCCAAGAGCTTCCATATTTGCACCAGCACCGTCACCTCTGTCAGATGGAGCTGGTCCTTTATCACCCAAATCATCAGTGGTGCCAGCGACGGGGTCGTTTCCAGGGTTCCAACCTGCAAATGGCCCTATTAGTGGCCTTACTTCTGGTGCTTCCGGTGCTTGCTCCTTAGTGAATCCTTTGCCCACTTTGACTTCTGCGCTTGTGTTTTTGCTTGTCAAGTTGATGATCTCTATGAGGTGTAACTTCTTCAATGGAGTATTTGCTAATGTTACTGTGAACTTACTGCATTTTTTTGGAAAGCACACTTCGGTTCGTTTTTCTTATGTACGTCCACGTGGCAATTATTGCATTGATGGATGA 588 0.4541 MPASLAVSCSSMQCKRSNLMLGNVTAQQNSGGCSINSCNYDGFANGTIITALSTSLQPRCPGPQQFPPLAAPPTTVPRASIFAPAPSPLSDGAGPLSPKSSVVPATGSFPGFQPANGPISGLTSGASGACSLVNPLPTLTSALVFLLVKLMISMRCNFFNGVFANVTVNLLHFFGKHTSVRFSYVRPRGNYCIDG 195
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0319 Lele-ChrLele04 1861077 1862480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0319 2 131 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 60.606 5.64e-48 160
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0319 04 1861077 1862480 Lele04g0319 04 1861077 1862480 ECH
Lele01g0315 01 1807531 1810721 Lele04g0319 04 1861077 1862480 hybridization
Lele02g0309 02 1739220 1740007 Lele04g0319 04 1861077 1862480 hybridization