Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0235 ATGGAGTCTTCAGGGTGGCTCAAACCCAACGCCGGCGGAGCTCCCTCTTGCCCTCGCTGTTCCTCCCCCAACACCAAGTTCTGTTACTTCAACAACTACAGCTTCTCCCAGCCCAGGTACTTCTGTAAATCCTGTCGCCGCTACTGGACCAAAGGCGGCTCTCTCCGCAACGTCCCCATCGGCGGCGCTGCTCGTAAGACCCGCCCTGCTAAACCCTCTCGCCATTCCCCTCAGACCTCATGCCTTTCCATCAGTGCCATTTCCTGTTCTCACGGCAAACCTAATTCCGACCCCGAATACGGTGGCTCCCATGTTGACATGGCCCTCCTGTTCGGCAAGTTTTTCAACCAAAACACCACCTCTCACCAAGATCACCAGCCCATGAGTGGATCGTCCAATTCTGGGACACAGGAAAGCCCTGAAGCCCAGAACGACGAGACTCGACGGCCGTCCGATCCGGTCTCAGACTGCGATCATGATCTGATAGGGGGGCTTCCTCAGCAAGAGGCAGCTCAGACGAAGTTCTCGGGACATGAGTGGGAGGGCTTGTTTGGTGCGGATGAAGTAGTCGAAGATGTTCTTTGGTCTGATATTACGACGTCGTCGGCGTTCGCCTGGCAACCTCCTAGTCCTATGATGGCATTTCCGGAGGAGTTGGAGTACTCGATGTCCTTGGGCGCACACGAACCAAGAATCATCCACCTTTTGCATGATTCGTATATGGCTACTGTTATCCATAATGGGCTTAATGGGCTTAGTTAG 762 0.5459 MESSGWLKPNAGGAPSCPRCSSPNTKFCYFNNYSFSQPRYFCKSCRRYWTKGGSLRNVPIGGAARKTRPAKPSRHSPQTSCLSISAISCSHGKPNSDPEYGGSHVDMALLFGKFFNQNTTSHQDHQPMSGSSNSGTQESPEAQNDETRRPSDPVSDCDHDLIGGLPQQEAAQTKFSGHEWEGLFGADEVVEDVLWSDITTSSAFAWQPPSPMMAFPEELEYSMSLGAHEPRIIHLLHDSYMATVIHNGLNGLS 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0235 253 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 14 146 IPR045174 GO:0003700|GO:0006355
Lele03g0235 253 Pfam Dof domain, zinc finger 16 68 IPR003851 GO:0003677|GO:0006355
Lele03g0235 253 ProSitePatterns Zinc finger Dof-type signature. 17 53 IPR003851 GO:0003677|GO:0006355
Lele03g0235 253 MobiDBLite consensus disorder prediction 142 156 - -
Lele03g0235 253 ProSiteProfiles Zinc finger Dof-type profile. 15 69 IPR003851 GO:0003677|GO:0006355
Lele03g0235 253 MobiDBLite consensus disorder prediction 56 79 - -
Lele03g0235 253 MobiDBLite consensus disorder prediction 119 141 - -
Lele03g0235 253 MobiDBLite consensus disorder prediction 119 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0235 Lele-ChrLele03 1286227 1287644 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0235 1 116 C2C2-Dof Transcription Factor Family AT3G52440 50.833 2.09e-33 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele03g0235 zf-Dof 1.8e-30 No_clan