Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0185 ATGGACACAGCTCAGTGGGCACAGGGGATTGGAGTGGTTAAACAGCCAGTGGTGGAAGGTTCAATTCCAAAGCCTCCTATGACCGAAAGGAAGGCGAGGCCTCAGAAAGATCAAGCTCTGAACTGCCCAAGGTGCAATTCAACCAACACTAAATTCTGCTACTACAATAACTACAGCCTCTCTCAGCCAAGATACTTCTGCAAGACTTGTAGAAGGTACTGGACCGAAGGTGGGTCCCTGAGAAATGTTCCCGTGGGTGGAGGCTCCCGAAAGAACAAGAGATCTTCATCTTTATCCTCATCATCAGCAATATCCTCAAAGAAGCTTCCTGATCTGAACCCCAAGATCCAGCAAGGCCAAGATCTTAACTTAGCATGTCCACCACCACCACCACCTGAGGACTATAACAATAGCGTATCGAAATTCATCGAGGCTCCTTTTAGTACTGAAGACAAGACTACACTTTCTCATCATCATGATCAGTTATCCTCCATGGAGCTTCTGAAGACTACTGGAATTCCGTCGTCAAGGACTTTATGTTCGTTGATGCCTATGTCGGCGTCGGATTCTTCCGGTTCGGCAATGTATAATTCAAGTGAGTTTCCTAATTTGCAAGATTTTAAGCCTCCTCCAGGGCTTAGTTTCAGTCTTGAAGGGTTTGCAAATGGGTACGGAGGTACTTCTGGAATGCACGAGGGAAGTAGTGGCGATGGTGGTGCGAGGTTGTTGTTTCCTACTGAGGATTTGAAGCAAGTTCGGAGTAGTACTGATCATTATGAGCAGAATAGAAGCCATGCGGATTCAACGGGCTTTTGGAATGGCATGTTAGGTGGAGGATCGTGGTGA 846 0.4681 MDTAQWAQGIGVVKQPVVEGSIPKPPMTERKARPQKDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSSLSSSSAISSKKLPDLNPKIQQGQDLNLACPPPPPPEDYNNSVSKFIEAPFSTEDKTTLSHHHDQLSSMELLKTTGIPSSRTLCSLMPMSASDSSGSAMYNSSEFPNLQDFKPPPGLSFSLEGFANGYGGTSGMHEGSSGDGGARLLFPTEDLKQVRSSTDHYEQNRSHADSTGFWNGMLGGGSW 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0185 281 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 28 188 IPR045174 GO:0003700|GO:0006355
Lele03g0185 281 MobiDBLite consensus disorder prediction 81 138 - -
Lele03g0185 281 ProSitePatterns Zinc finger Dof-type signature. 42 78 IPR003851 GO:0003677|GO:0006355
Lele03g0185 281 MobiDBLite consensus disorder prediction 89 120 - -
Lele03g0185 281 Pfam Dof domain, zinc finger 37 94 IPR003851 GO:0003677|GO:0006355
Lele03g0185 281 ProSiteProfiles Zinc finger Dof-type profile. 40 94 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0185 Lele-ChrLele03 984261 985627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0185 27 281 C2C2-Dof Transcription Factor Family AT3G61850 45.620 2.49e-61 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele03g0185 zf-Dof 1.1e-33 No_clan