Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0308 ATGCCAAACAGAAAATCCACCTGGCAAAGCACTATCGTCTTGTTACTTTTGCAGGTTTTGAATTTGATCGATGTCGCTCATGTGAGGTGCAAATCTACAATCGAGCCCTGCTCCATCTCCGATTCCTGCAATGCTCTGCTCGGATATACGCTCTACACTGACCTAAAGGTCTCTGAGGTGGCCTCCCTCTTTCAAATCGACCCAATTGCACTTCTCACTGCCAATGCCATTGACATTTCTTATCCCGACGTGGAGCATCACATTCTTCCCTCTCGGCTCTTCCTCAAAATCCCTATTACCTGTTCGTGTGTTGATGGAATTCGCAAATCGGTCTCGACCCACTACAAAACTCGGCCCTCTGATACTCTCTCTTCGATTGCGGATTCGATATATGGGGGTCTGGTGTCTGCTGACCAGCTCAGGGAAGCCAATTCGATAAATGACCCTTCGGTACTGGATGTGGGTCAGAATCTTGTAGTGCCGCTTCCATGCACCTGCTTCAATGGTACCGATAACTCTTTGCCTGCAATCTACCTGTCGTATGTGGTCCAGCCAATCGATACTTTAGCCGCAATTGCCGCTAGGTATTTCACCACTCTGACTGATCTGATGAACGTCAATGCCATGGGAAGTTCGGCTATCAACGATGGCGATATTCTCGCTATACCGATACCCGCTTGTGCATCAAATTTCCCAAAATATGCCTCTGATCACGGTTTGCTTGTCCCTAACGGAAGCTACGCCATCACAGCGGGTCACTGTGTGCTATGTAGCTGTGGGCCACGAAATTTAAAGTACTGA 801 0.4831 MPNRKSTWQSTIVLLLLQVLNLIDVAHVRCKSTIEPCSISDSCNALLGYTLYTDLKVSEVASLFQIDPIALLTANAIDISYPDVEHHILPSRLFLKIPITCSCVDGIRKSVSTHYKTRPSDTLSSIADSIYGGLVSADQLREANSINDPSVLDVGQNLVVPLPCTCFNGTDNSLPAIYLSYVVQPIDTLAAIAARYFTTLTDLMNVNAMGSSAINDGDILAIPIPACASNFPKYASDHGLLVPNGSYAITAGHCVLCSCGPRNLKY 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0308 266 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 14 263 - -
Lele02g0308 266 SMART LysM_2 114 161 IPR018392 -
Lele02g0308 266 SMART LysM_2 180 223 IPR018392 -
Lele02g0308 266 ProSiteProfiles LysM domain profile. 113 160 IPR018392 -
Lele02g0308 266 SUPERFAMILY LysM domain 179 224 IPR036779 -
Lele02g0308 266 Pfam LysM domain 115 161 IPR018392 -
Lele02g0308 266 Pfam LysM domain 181 223 IPR018392 -
Lele02g0308 266 Gene3D LysM domain 107 168 IPR036779 -
Lele02g0308 266 SUPERFAMILY LysM domain 113 162 IPR036779 -
Lele02g0308 266 Gene3D LysM domain 169 231 IPR036779 -
Lele02g0308 266 ProSiteProfiles LysM domain profile. 179 222 IPR018392 -
Lele02g0308 266 CDD LysM 113 160 IPR018392 -
Lele02g0308 266 CDD LysM 180 222 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0308 Lele-ChrLele02 1738081 1739114 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0308 31 264 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 79.661 9.22e-138 392