Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0315 ATGCGACCGATAGACCTGTGTAGCTACAAAGTACCCGCTATTGATCTCTCTGTTCCCCAATCCAAGTCCCTCTTCTCTCTCAAATTTTTACTCATTCTCCCCAGAGTGCAGCTAGATAAAGACGTGGCCACAATGCCAAACAGAAAATCCACCTTGCAACGCCCTATCGTCTTGTTACTTTTGCAGGTCTTGAATTTGATCAATGTCGCTCATGTGAGGTGCAAATCTACAATCGAGCCCTGCGCCAACTCTGACTCCTGCAATGCTCTGCTCGGATATACTCTCTACACTGACCTAAAGGTCTCTGAGGTGGCCTCCCTCTTTCAAATCGACCCAATTGCTCTTCTCACTGCCAATGCCATTGACATCTCTTATCCCGACGTGGAGCATCACATTCTTCCCTCTCGGCTCTTCCTCAAAATCCCTATTACCTGTTCGTGTGTTGATGGAATTCGCAAATCGGTATCGACGCACTACAAGACTCGGCCCTCCGATACTCTCTCTTCGATTGCGGATTCGATTTATGGGGGTCTGGTGTCTGCTGACCAGGTCAGGGAAGCCAATTCGATAAGTGACCCTTCGGTACTGGACGCGGGTCAGAATCTTGTCGTGCCGCTTCCATGCACTTGCTTCAATGGTACCGATAACTCATTGCCTGCTATTTACCTGTCGTATGTGGTCCAGCCAATCGATACCTTGGCCGCACTTGCCGCGAGGTATTTCACCACTCTGACTGATTTGATGAACGTCAATGCCATGGGAAGTTCAGCTATCAACGATGGCGATATTCTCGCTATACCGATACCCGCTTGCGCATCAAATTTCCCAAAATATGCCTCTGATCATGGTTTGCTTGTTCCTAACGGAAGCTACGCCATCACAGCGGGTCACTGTGTGCTATGTAGCTGTGGGCCGCGAAATTTAAATTTATACTGTATGCCTGCTTCCCTGGCTGTTTCTTGTTCCAGCATGCAATGTAAAAGAAGCAATCTCATGCTCGGAAATGTTACAGCTCAACAGAATAGTGGTGGTTGCAGTGTTAATTCTTGCAATTATGACGGTTTTGCTAATGGCACCATAATAATAGCATTGTCTACATCTCTTCAACCTCGATGTCCAGGGCCGCAGCAATTTCCTTCGCTCGCAGCACCGCCTACTACTGTTCCAAGAGCTTCCATATTTGCACCAGCACCGTCACCTCTGTCAGATGGAGCTGATCCTTTATCACCCAAATCATCAGTGGTGCCAGCGACTGGTTCATTTCCGGGGGTCCAACCTGCAAATGGCCCTATTAGTGGCCTTACTTCTGGTGCTTCCGGTGCTTGCTCCTTAGTGAATCCTTTGCCTACTTTGACATCTGCACTTGCGTTTTTGCTTGTCAAGTTGATGATCTCTATGCTGCTTGGTCCTTGGGTCTGTTCTGACAACCTTTTTTCAATAATTGCATTGATGGAGGAAAGACTAGTCCCAAAGAGAGCTTGCAATAATCGTTCTGTTCCCATAGTTACCACTTACCGGCCTTGCCCTTGCCATATTGCCGTTTAA 1545 0.4777 MRPIDLCSYKVPAIDLSVPQSKSLFSLKFLLILPRVQLDKDVATMPNRKSTLQRPIVLLLLQVLNLINVAHVRCKSTIEPCANSDSCNALLGYTLYTDLKVSEVASLFQIDPIALLTANAIDISYPDVEHHILPSRLFLKIPITCSCVDGIRKSVSTHYKTRPSDTLSSIADSIYGGLVSADQVREANSISDPSVLDAGQNLVVPLPCTCFNGTDNSLPAIYLSYVVQPIDTLAALAARYFTTLTDLMNVNAMGSSAINDGDILAIPIPACASNFPKYASDHGLLVPNGSYAITAGHCVLCSCGPRNLNLYCMPASLAVSCSSMQCKRSNLMLGNVTAQQNSGGCSVNSCNYDGFANGTIIIALSTSLQPRCPGPQQFPSLAAPPTTVPRASIFAPAPSPLSDGADPLSPKSSVVPATGSFPGVQPANGPISGLTSGASGACSLVNPLPTLTSALAFLLVKLMISMLLGPWVCSDNLFSIIALMEERLVPKRACNNRSVPIVTTYRPCPCHIAV 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0315 514 ProSiteProfiles LysM domain profile. 157 204 IPR018392 -
Lele01g0315 514 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 58 376 - -
Lele01g0315 514 Gene3D LysM domain 151 212 IPR036779 -
Lele01g0315 514 SMART LysM_2 158 205 IPR018392 -
Lele01g0315 514 SMART LysM_2 224 267 IPR018392 -
Lele01g0315 514 CDD LysM 157 204 IPR018392 -
Lele01g0315 514 Gene3D LysM domain 214 275 IPR036779 -
Lele01g0315 514 SUPERFAMILY LysM domain 223 268 IPR036779 -
Lele01g0315 514 Pfam LysM domain 159 205 IPR018392 -
Lele01g0315 514 Pfam LysM domain 225 267 IPR018392 -
Lele01g0315 514 CDD LysM 224 266 IPR018392 -
Lele01g0315 514 ProSiteProfiles LysM domain profile. 223 266 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0315 Lele-ChrLele01 1807531 1810721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0315 53 443 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 67.259 0.0 543
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0315 01 1807531 1810721 Lele01g0315 01 1807531 1810721 ECH
Lele01g0315 01 1807531 1810721 Lele03g0323 03 1800221 1805722 hybridization
Lele01g0315 01 1807531 1810721 Lele04g0319 04 1861077 1862480 hybridization