Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0229 ATGGAGTCTTCAGCGTGGCTCAACCCCAACGCCGGCGGAGCTCCCTCTTGCCCTCGCTGTGCCTCCTCCAACACCAAGTTCTGTTACTTCAACAACTACAGCTTCTCCCAGCCCAGGTACTTCTGTAAATCCTGTCGCCGCTACTGGACCAAAGGCGGCTCTCTCCGCAACGTCCCCATCGGCGGCGCTTCTCGTAAGACCCGCCCTGCTAAACCCTCTCGCCATTCCCCTCAGAACTCACGACTTTCCATCAGTGTCATTTCCTGTTCTCACGGCAAACCTAATTCCAACCCGGAATCCGGTGGCTCCCATGTTGACATGGCCCTCCTGTTCGCCAAGTTTTTCAACCAAAGCACCACCTCTCACCAAGAATGCCATCACCAGCCCATGAGTGGATCGTCCAATTCTGGGACACCGGAAAGCCCTGAAGCCCAGAATGACGAGACTCGACGGCCGTCCGATCCTGTCTCAGACTGCGATCATGATCTGATAGGGGCGCTTCCTCAGCAAGAGGCAGCTCAGACGAAGTTCTCGGGACATGAGGGGGAGGGCTTGTTTGGTGCGGATGAAGTAGTAGAAGATGCTCTTTGGTCTGATATTACGACGTCGTCGGCGTTCGCCTGGCAACCTCCTAGTCCTATGATGGCATTTCCGGAGGAGTTGGAGTACTCGATGTCTTTGGGGATGCCCTTCCACGGCGGCGATCAATTCCCAATTACTTCCACAGTGCTTCCTTCAATTTAA 744 0.5511 MESSAWLNPNAGGAPSCPRCASSNTKFCYFNNYSFSQPRYFCKSCRRYWTKGGSLRNVPIGGASRKTRPAKPSRHSPQNSRLSISVISCSHGKPNSNPESGGSHVDMALLFAKFFNQSTTSHQECHHQPMSGSSNSGTPESPEAQNDETRRPSDPVSDCDHDLIGALPQQEAAQTKFSGHEGEGLFGADEVVEDALWSDITTSSAFAWQPPSPMMAFPEELEYSMSLGMPFHGGDQFPITSTVLPSI 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0229 247 MobiDBLite consensus disorder prediction 56 82 - -
Lele01g0229 247 MobiDBLite consensus disorder prediction 121 161 - -
Lele01g0229 247 ProSiteProfiles Zinc finger Dof-type profile. 15 69 IPR003851 GO:0003677|GO:0006355
Lele01g0229 247 ProSitePatterns Zinc finger Dof-type signature. 17 53 IPR003851 GO:0003677|GO:0006355
Lele01g0229 247 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 14 147 IPR045174 GO:0003700|GO:0006355
Lele01g0229 247 MobiDBLite consensus disorder prediction 144 158 - -
Lele01g0229 247 Pfam Dof domain, zinc finger 16 68 IPR003851 GO:0003677|GO:0006355
Lele01g0229 247 MobiDBLite consensus disorder prediction 121 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0229 Lele-ChrLele01 1314408 1315151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0229 8 116 C2C2-Dof Transcription Factor Family AT3G52440 56.881 2.87e-37 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele01g0229 zf-Dof 6e-31 No_clan