Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02322 ATGCTTGATTCGGTTCTTCTCGCGCTTTTCTTGCCGTGTCTTGGCATGAGCGCGGTTTTCATCGTCTACATGTGTCTTCTTTGGTACGCCACCACCCGACACCAACCCCCCGGCCACGGCCTACCGCTGAAGCAGGTCGCTGACAAGGGTCTCTCCGCTTTGGAGTTGGAGAAGCTTCCCAGGATCACCGGCAAAGAACTGGTCTTGGGCACCGAATGCGCCGTCTGCCTGGACGAGATCGAGGGCGAGCAACCGGCCAGACTGGTCCCCGGTTGCAACCACGGCTTCCATGTCCATTGCGCCGACACCTGGCTCTCCAACCACCCGCTTTGCCCCGTTTGTAGGACCAAACTCGACCCCCAGATTTTCACTTCCCATAACCCCTGCTGA 390 0.5897 MLDSVLLALFLPCLGMSAVFIVYMCLLWYATTRHQPPGHGLPLKQVADKGLSALELEKLPRITGKELVLGTECAVCLDEIEGEQPARLVPGCNHGFHVHCADTWLSNHPLCPVCRTKLDPQIFTSHNPC* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02322 129 ProSiteProfiles Zinc finger RING-type profile. 73 115 IPR001841 -
Lapu9g02322 129 Pfam Ring finger domain 72 115 IPR001841 -
Lapu9g02322 129 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 16 125 - -
Lapu9g02322 129 SUPERFAMILY RING/U-box 72 121 - -
Lapu9g02322 129 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 41 121 IPR013083 -
Lapu9g02322 129 SMART ring_2 73 114 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02322 Lapu-Chr9 37790103 37790973 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02322 9 37790103 37790973 Lapu9g02322 9 37790103 37790973 ECH
Lapu8g01050 8 28525845 28527339 Lapu9g02322 9 37790103 37790973 PCT