Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02316 ATGGTTACTACTACCGTTGATCCATCCTCTAATCATCACTCCCTCCCTGGTGGTGCCGATACCTATAACTTCCCGCGAAAAAACCTGCCATCTCCGTGGGCCCAGGTCGTTCGCGGTGCCGACTCTGAACCTAACCATCAATCACCGCCTTCTTCTTCCTCTTCCTCGTCCCTCGATTCTGTTAATTCTAACGGTCCCGCTGCTGATACCGTTGATGCCGCCGTGAAACCTGTGTGGAAGAGACCGTCAAATGACGCCACTGAAGTTGGGCCTGTAATGGGCGCAATATCTTGGCCCGCTTTATCGGAGTCCACCAAGCCCACTCCTAAATTGTCATCTGACTCCTCAGTCAGGACTACTATCGATGATGAATCACTCACCCCTCCTCAGGGTCCTGTTATTTCAGACTCTCCTCAGAAACAAGCTACTGATAATGTGAAACCTGGTCCTGCACTAAACTATGGTATGGGTAATAGACAAAGGTCAATGAAGCGTGGAGGGGCAAATGGCAATAATTTTGGCCCCTGTCCTGTTCAGAACAACTTCTCTGGCGTTTCCCCAAATCTTCCTCCACCCCCACCCTTTCCCGTCCTTCAGGTTCCTCCAAATACATTTGCACATGGGACACCTGGAGTTCCAGTTCCTTCTCCAAGAGATGCTTACAGGAACAATAACTGGGATAAGAGGCATCCGCTTGGAGGGTTTATGCCGCCAATGAATGAGAATCGGAGTCCCTCTCGCAGGGGAAATGGTGGACATCATCCACGTGGAGATGGATCCTATCACCGCAGTTATGGCAACAGGCGTGAGCAGGATCGTGGAAGTTATGCAAATACTAGAGATACTCATGTAAATCATCACAGGATGCCTCCAAGGGGATTAATGAGGCCTCCGCCTCCTAATCCTGCGTCGTTTATGGGGCCTCAGCCTATGCGACCCTTTGCAAACCCTCATGGGTTTCCTGAATTCTATTATTTCCCAACACTACAATTTGAACCCTTTGGAGGCATGCCGTTTTTAACACATGCACCTCCTCCTGCAATGTTCTTACCGGTTGCAGAAACCCCTCTCACCAATACAATAGTCAACCAAATTGATTATTACTTTAGTGATGCTAATTTAGTGAGGGATGAGTATTTAAGGTCCAACATGGATGAACATGGATGGGTTCCTATTAGTCTGATTGCAAGCTTCCCACGTGTTAGAAGTTTGACAAGCGACATTAAGTTGATACTGGAATCATTGAGAACTTCCACTGTCGTTGAAGTGCAGGGTGACAAGCTGAGGAGGCGTAACGAGTTGACCAAGTGA 1311 0.4836 MVTTTVDPSSNHHSLPGGADTYNFPRKNLPSPWAQVVRGADSEPNHQSPPSSSSSSSLDSVNSNGPAADTVDAAVKPVWKRPSNDATEVGPVMGAISWPALSESTKPTPKLSSDSSVRTTIDDESLTPPQGPVISDSPQKQATDNVKPGPALNYGMGNRQRSMKRGGANGNNFGPCPVQNNFSGVSPNLPPPPPFPVLQVPPNTFAHGTPGVPVPSPRDAYRNNNWDKRHPLGGFMPPMNENRSPSRRGNGGHHPRGDGSYHRSYGNRREQDRGSYANTRDTHVNHHRMPPRGLMRPPPPNPASFMGPQPMRPFANPHGFPEFYYFPTLQFEPFGGMPFLTHAPPPAMFLPVAETPLTNTIVNQIDYYFSDANLVRDEYLRSNMDEHGWVPISLIASFPRVRSLTSDIKLILESLRTSTVVEVQGDKLRRRNELTK* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02316 436 MobiDBLite consensus disorder prediction 41 67 - -
Lapu9g02316 436 MobiDBLite consensus disorder prediction 1 17 - -
Lapu9g02316 436 MobiDBLite consensus disorder prediction 1 155 - -
Lapu9g02316 436 Pfam La domain 361 416 IPR006630 -
Lapu9g02316 436 MobiDBLite consensus disorder prediction 101 146 - -
Lapu9g02316 436 ProSiteProfiles La-type HTH domain profile. 351 436 IPR006630 -
Lapu9g02316 436 Gene3D - 351 436 IPR036388 -
Lapu9g02316 436 MobiDBLite consensus disorder prediction 208 293 - -
Lapu9g02316 436 CDD LAM 361 431 - -
Lapu9g02316 436 SUPERFAMILY "Winged helix" DNA-binding domain 348 433 IPR036390 -
Lapu9g02316 436 SMART la 355 433 IPR006630 -
Lapu9g02316 436 PANTHER LUPUS LA PROTEIN-RELATED 95 436 IPR045180 -
Lapu9g02316 436 MobiDBLite consensus disorder prediction 247 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02316 Lapu-Chr9 37754978 37760177 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02316 9 37754978 37760177 Lapu9g02316 9 37754978 37760177 ECH
Lapu8g01041 8 28472297 28477438 Lapu9g02316 9 37754978 37760177 PCT