Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02285 ATGGATCGACGCTGGCCTTGGAAGAAAAAATCATCAGAGAAGGCTGTGATTGAGAAAGCAGCTACTGCATTGGATTCCTCCGATGCTTCCAACAACCAGGATAACAAGAAACCAAACTACATCCAAATCTCAGTGGAATCCTACTCACATTTGTCTAGCTTGGAGGATCAAGTGAAGACATACGAGGAAAAAGTTCAGGCACTGGAAGATGAGGTCAAGGAAATTAATGAAAAGCTGTCCGCAGCAAACTCCGAGATCAATACCAAGGAAAGCATGGTAAAGCAACATGCTAAAGTTGCTGAGGAAGCTGTATCAGGCTGGGAAAAGGCTGAAGCTGAGGCTTTGGCATTGAAGAATCATCTAGAATCTGTCACTCTTTTAAAACTCACTGCTGAGGATCGTGCAACACATTTAGATGGTGCTCTTAAAGAGTGTATGCGACAAATACGAAACCTTAAGGAAGAGCATGAGCTGAAAATACAGGAAGTCGCTCTCTCAAAAACCAAGCAACTGGACAAGATTAAGGGGGAGCTCGAGGCAAAGATAGTGAATTTTGAACAGGAACTTCTTAGGTCTGCTGCTGAAAATGGGGCCCTGTCAAGGTCATTGCAGGAGCGTTCTAACATGCTAATCAAATTAAGTGAAGAAAAGGCTCGTGCTGAGGCTGAAATTGAGCTTCTTAAGGGCAACATAGAGGCATGTGAAAGGGAAAATAATTCACTTAAATATGAACTACATGTTGTTTCCAAAGAACTTGAAATTCGCAATGAAGAAAAAAACATGAGTATGAGGTCTGCAGAAGCTGCAAACAAGCAGCATATGGAGGGTGTAAAAAAAATTGCAAAGTTAGAGGCTGAGTGTCAAAGATTACGTGGTCTTGTGAGGAAAAAGTTACCTGGTCCTGCTGCACTTGCACAGATGAAGATAGAAGTTGAAAGCCTTGGCCGAGATTTTGGAGAAAGTCGATTAAGGAAGTCCCCTGTGAAGCCTGCTTCCCCTAATCTGTCTCCATTACCCGATTTCTCCCAGGAGAATGTGCAGAAATTCCAGAAGGATAATGAATTTCTTACAGAGCGTTTATTGGCAATGGAAGAAGAAACAAAGATGCTGAAAGAAGCTTTGGCTAAACGTAACAGTGAGTTGCAGGCTTCAAGGAGTATGTGCGCTAAAACACTGAGCAAACTTCAAAGTTTGGAAGCACAATCGCAGACAAGTAACCAGCTGAAAGGATCTCCAAAATCCATCGTCCAGATAACTCACGAAAGCATTTATAATCAAAATGCAAGCAGTGCACCAAGCTTGGTCTCCATGTCTGAAGATGGAAATGATGATGCAGTAAGTTGTGCTGAATCTTGGTCTACAGCAATAGTCCCTGGGCTATCCCAATTTCCTAAAGAAAAATGCTCTGAGGAATCAAGCAAATCTGAAGTCTCTAATAAGTTGGAACTAATGGATGACTTTCTGGAGGTGGAGAAGTTGGCTCGTTTGTCAAATGATTCCAATGTAGACGCCACTGTTTCAGTTTCTTCATACAATAAGACAAATGACAGTGTGACTGATGATGTATCAGAAGTCAGCAATGGCAAAGAAGGTCTGTCTGAAAAAATTGGCAATCTAAATCCATTGCAAAATCAAGTGTCTTCTGATGCTTTGATGTCAGCACCTCATCTCAAATCCGATGCTAGTGGCTTGCTATTAGCAGAACTTAGATCAAGAATATTACTGGTTTTTGAGTCCTTAGCCAAGGATGCTGACATAGGGAAGATTGTGGAGGATATTAAACATGTGCTTGAAGATTCGCATGACACTACTATCCGGCACTCGGTGGATGCGCATCCTTCTGATGCTCCGTATGATAGGAAGGATAATCCGGAAGATGCTGACTTAAACCTTGAAAAGTACACCATTTCATCCCAGCAACCCAGAGAATATGTGCATATAACTTCAGATCTGGAAGTTGCAATTTCTCAGATTCATGACTTTGTACTGCTCCTTGGCAAGGAAGCAATGACATTTCATGACATTTCTTGTGATGGAAATGAAATGAAGCAAAAGATTGAGGAGTTCTCTGTTACATTTGATAAAATATTAAGCAACAATGCAAGTTTGCTACAGTTTGTTCTTGACCTGTCCTATGTTCTAGATAAAGCAAGTGAGTTCAGATTTAATGTTCTTGGCTACAAGGGCTCCGAAGTTGAAAGCAACAGTCCTGATTGCATAGATAAGATTGCCTTGCCTGAAAATAAGTTATTACAAGACAGTTCATCCCGAGAAAGATATCAAAATGTCTGTTCCCATGTTCTTAATACGTGTTCTAATCCTGAGGTTCCCGATGATGGAAATTTGGTCTCAGGCTATAAAGCGGATGCTGCATCACAAAAACCGTCAATGCAAGAGTTTGAAGAATTGAAACTAGAGAAAGAAAAAGTAATGACTGATCTGTCAAATTGTGCTGAATCTCTTGAAATAACCAAGTCTCAGTTGCTAGAGACTGAACAACTTCTAGCTGAAGTTAAATTACAATTGGCTTCTGCTAAAAAATCAAACAGCTTGGCTGAGACACAGTTAAAGTGTATGGCAGAATCGTACAATTCACTTGAAACACGTGCCCAGGACTTGGAAACTGAGATGAACCGGCTGCAAATTAAGATAGAATCTCTGGAGAATGAACTTCAAGATGAAAAGAAGGCTCATGAAGCTTCTTTGGCCAGGAGCAAGGATCTAGAAGTGCAGTTACAAAGGATCGAGTACTCGGCAGCTGATGATGACCTCAAGACTTCGCATGATAGAGATTTGACAGCTGCTGCTGAAAAGCTAGCCGAGTGTCAGGAAACCATACTTCTTCTGGGCAAGCAGTTAAATGCTCTACGTCCACAAACTGAGCTAATTGATTCGTCGTACAGTAAGATAAATCCAAAGGATGAAGGATTCAAAGAAGATGAACCCACTACCAATAGCCCAAAATTTCAAGAATTAGGTCAGATGGAAATGGACAATGCTACTTCTGCTTTTGTGCAAAGATTGAGTTCGGAGTCCCCCTTACATTTTTCCAACAGTTTATTTAGCCCTTCGGACAGCGAGTCCACCCTTCCAGCCAGATCCCCAGTACAGCATTCTAAATCAAAACCAAAACACAGGCCTACCAAGTCAGCCTCTTCTTCAGTTTCTTCTGCCACTACACCTGAGAAGCATGCACGGGGATTTAGTAGATTCTTTTCACCAAAAGGGAAATCCGGTCATTGA 3243 0.415 MDRRWPWKKKSSEKAVIEKAATALDSSDASNNQDNKKPNYIQISVESYSHLSSLEDQVKTYEEKVQALEDEVKEINEKLSAANSEINTKESMVKQHAKVAEEAVSGWEKAEAEALALKNHLESVTLLKLTAEDRATHLDGALKECMRQIRNLKEEHELKIQEVALSKTKQLDKIKGELEAKIVNFEQELLRSAAENGALSRSLQERSNMLIKLSEEKARAEAEIELLKGNIEACERENNSLKYELHVVSKELEIRNEEKNMSMRSAEAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKIEVESLGRDFGESRLRKSPVKPASPNLSPLPDFSQENVQKFQKDNEFLTERLLAMEEETKMLKEALAKRNSELQASRSMCAKTLSKLQSLEAQSQTSNQLKGSPKSIVQITHESIYNQNASSAPSLVSMSEDGNDDAVSCAESWSTAIVPGLSQFPKEKCSEESSKSEVSNKLELMDDFLEVEKLARLSNDSNVDATVSVSSYNKTNDSVTDDVSEVSNGKEGLSEKIGNLNPLQNQVSSDALMSAPHLKSDASGLLLAELRSRILLVFESLAKDADIGKIVEDIKHVLEDSHDTTIRHSVDAHPSDAPYDRKDNPEDADLNLEKYTISSQQPREYVHITSDLEVAISQIHDFVLLLGKEAMTFHDISCDGNEMKQKIEEFSVTFDKILSNNASLLQFVLDLSYVLDKASEFRFNVLGYKGSEVESNSPDCIDKIALPENKLLQDSSSRERYQNVCSHVLNTCSNPEVPDDGNLVSGYKADAASQKPSMQEFEELKLEKEKVMTDLSNCAESLEITKSQLLETEQLLAEVKLQLASAKKSNSLAETQLKCMAESYNSLETRAQDLETEMNRLQIKIESLENELQDEKKAHEASLARSKDLEVQLQRIEYSAADDDLKTSHDRDLTAAAEKLAECQETILLLGKQLNALRPQTELIDSSYSKINPKDEGFKEDEPTTNSPKFQELGQMEMDNATSAFVQRLSSESPLHFSNSLFSPSDSESTLPARSPVQHSKSKPKHRPTKSASSSVSSATTPEKHARGFSRFFSPKGKSGH* 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02285 1080 Coils Coil 51 92 - -
Lapu9g02285 1080 Coils Coil 346 373 - -
Lapu9g02285 1080 Coils Coil 821 908 - -
Lapu9g02285 1080 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1075 - -
Lapu9g02285 1080 Coils Coil 135 162 - -
Lapu9g02285 1080 Pfam Filament-like plant protein, long coiled-coil 89 962 IPR008587 -
Lapu9g02285 1080 MobiDBLite consensus disorder prediction 1015 1080 - -
Lapu9g02285 1080 Coils Coil 168 195 - -
Lapu9g02285 1080 MobiDBLite consensus disorder prediction 322 341 - -
Lapu9g02285 1080 MobiDBLite consensus disorder prediction 1015 1036 - -
Lapu9g02285 1080 MobiDBLite consensus disorder prediction 966 989 - -
Lapu9g02285 1080 Coils Coil 203 286 - -
Lapu9g02285 1080 MobiDBLite consensus disorder prediction 971 985 - -
Lapu9g02285 1080 MobiDBLite consensus disorder prediction 1048 1063 - -
Lapu9g02285 1080 SUPERFAMILY Tropomyosin 799 963 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02285 Lapu-Chr9 37425982 37432028 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02285 9 37425982 37432028 Lapu9g02285 9 37425982 37432028 ECH
Lapu8g01010 8 28231611 28238263 Lapu9g02285 9 37425982 37432028 PCT