Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02265 ATGAGGTCCGGAGGCGCAGGAAGCAGCGGCATGAACTGTCAGGACTGTGGTAACCAAGCCAAGAAAGATTGTACACATCTCAGATGCAGGACCTGCTGTAAGACCCGAGGGTTTCAGTGTCAAACCCACGTTAAGAGCACTTGGGTTCCCGCAGCCAAACGCCGCGAACGACAACAACAACTCGCTGCCTTGCAGCACCCACAACAATTTCGCGGGGAGAATATTCCCAAACGATATCATAGAGACACTCAACTCGTCTCCGCTCCACAACCCATCGCAGGGTTAGAGCTGGGGCAATTCCCACCTGAAGTGAGCACTTCCGCGATGTTTCGGTGTGTGAGAGTCAGCGCATTGGACGCTTCAGATGAACAGTGCGCGTATCAAACTTCTGTCAACATCGGAGGGCATGTTTTCAAGGGAATTCTCTACGATCAAGGTCCTGAAAGTTTTTACACCAGTGCAGCTACCGAGGGTTCCTCCGGTGGTGAACCCCGACAACTTGGTTTAATAACCGCCGCAGCCACTGCCACAGCCGCAACAACCAGTGGAAACAACCCATTTGACCCTTCACTCTACCCCGCTCCGTTGAATGCTTTCATGTCTGGTACACAATTCTTCCACCCCCCAAGGTCCTAA 636 0.5267 MRSGGAGSSGMNCQDCGNQAKKDCTHLRCRTCCKTRGFQCQTHVKSTWVPAAKRRERQQQLAALQHPQQFRGENIPKRYHRDTQLVSAPQPIAGLELGQFPPEVSTSAMFRCVRVSALDASDEQCAYQTSVNIGGHVFKGILYDQGPESFYTSAATEGSSGGEPRQLGLITAAATATAATTSGNNPFDPSLYPAPLNAFMSGTQFFHPPRS* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02265 211 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 6 197 IPR007818 GO:0003700|GO:0006355
Lapu9g02265 211 NCBIfam LRP1 C-terminal domain 99 147 IPR006511 -
Lapu9g02265 211 NCBIfam putative zinc finger domain, LRP1 type 12 54 IPR006510 -
Lapu9g02265 211 Pfam Domain of unknown function (DUF702) 10 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02265 Lapu-Chr9 37223154 37224908 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Lapu9g02265 DUF702 2e-61 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02265 9 37223154 37224908 Lapu11g00790 11 10731138 10732085 ECH
Lapu9g02265 9 37223154 37224908 Lapu9g02265 9 37223154 37224908 ECH
Lapu8g00996 8 28051982 28053422 Lapu9g02265 9 37223154 37224908 PCT