LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu9g02207	ATGGAGAGATTTTATTCTTCTCAACGAGAAAGCGTTCTTTTAGGTTATAATAATAATAATAATAATAATAATAATAATAATAATAATACTTATGAGAATGGTAATAATTCTCTGATTCGGAGGTCGTCGTCGAGCAATTCGAACTTGGAGGTTGATTTCAACGACGTGTTTGGGGGGCCGCCGCGGAGGTCATCGCTAAACGAAGCGCGGCAGAGTCTGAGCGACTTGAAGGATTGGAGCGAAGAGGAAGGGGAAAAAGGTTGGTGTAGGTGGCCGCCGGAGCGGGAGAAACCGGTGTTTGGAGAGGATAGTGGAAACCGGAGGCGTCACGCGAACAAGAACAATGACTTCTTCGATGACATATTCGGAGGGGAGGAGTCGGCGAGTGTGTGTTCCACGCCGAAGAAGCGCGTTGGGGAACCTTTCACGTTCTCTCGAGTGTCCAGTCCTCTACCTCCCGCCGCCGATCCCAGTGCTACCTCCCTCCCTCTACCATTCAGCCTTCCAGCCAAATTGACAAATGGAGTGGACCTTCCAACATTTGGTTCCCCCACGAGAAGTAACAACATCAACGATGGTATTCTTGCTTCAAATGGACTAGGGCTTTCAGATTCTCATTCATCCAGATTTTCAACTCAGCGAAAGGAGTTGAAAAAGGATTTTAAACCTTACCGACAAAGTCTTCTATCACAGGAGTTTTCAAACTCGAGCACATCTGATAAAGCAGACAAAGGAGGCATCATGAAACAAGACATATCTATTAGTGAAGTTTCGCCTAGTGCTGGTAATGGTCAATTCCATTTCTCAATATACAAATGGGCAAGTAAAGGTGTGCCAATGGTGATGTCTCTTAGATCAGAAAGAGCCTCAAAGGCTAAGGATAAGGTTAAGTTTGAGAGATGCTCAAGTGCTAAAGAATGGGTGGGCAGTGAGATTAGCACACAAAAACCTATGGCACATAATGGTTCCTCTGTGATGAATAATGGAAAAGAAGATGTATCAACTACTTCCACAGCCACTGAAAATGGAGCAGATTCAAACCAGATTGTAGAACAAATAGTTTCTGCCAAGGCTCAATCACATACATCATGCAGCCCTCAAAATGTTACCATAGATGTTCCCGCTTGTTCTAGAGTAGTAGAATCAAGTACTCATTCTGCAGACATGAACGGCTTCTCTGGAAAAACTGAGATAGGAAGGAGGGATACTCATAAGCTTGAGTCCAAACCTTTACAGTTTCTGTTCAAAGAAAATGATAAGAAACAAGATAATGATCAGATGATTACAAGGGAGAAAGAAGAAAACAGGACGAAAAGCACAAAAAAATTGTCTGCTGTTTTTGATGTTACCGAGAATTCCATGAAACAAGAAGAAAAGAAAGTTTCAGTGATAGATGTAGGACATAGCAAAGCCACTTCGCAGGGTTCAGTAAGCTTAAGTGAGAATACGGGGAAAGGCCTGGTTAAAGGAAAGGTCAAAGAATTCGCTCGAATTTTCAACCAAGAAACTGCGACAAAACCAAAAGTTGACTCCAAATCTCGACCACAGGGTTCTACATACAAGCAGAGAGATGCGTTGAGGACAAAGAATGAAGTGGAAAGTGAGCCTGAACAATCCAAGAAGGAGAACTCTACCATAGAGACCACCAACATATCTGCTGATAATTTGTCTCGTCATGAGGATATATCAGAAGCAGCAGCAATTCCTGATATATCATTTACTGTTATCGGAGATAAAGACGAGTCCTTCCACGGGGGTTTCATGATACAAGTTTTATCCCAAGATGAGGGCGAGGACTTACAAAATCAAGAAATCCAAACGATTGACAAGAAGATAAAACAGTGGTCTAAAGGGAAGGAAGGAAACATACGATCCCTGCTATCGACATTACAACATGTACTTTGGACGGAATGTGGATGGAAGCCTGTGCCTCTTGTTGATATAATTGAAGGGAACGCAGTGAAAAGATCTTATCAAAGAGCTTTACTCTGCCTGCATCCCGATAAGTTGCAGCAAAAGGGTGCTTCTTCAGACCAAAAATATATTGCAGAAAAAGTTTTTGATATTTTACAGGAGGCATGGACTCAATTCAATATGCTCGGTGCACTCTAA	2112	0.4242	MERFYSSQRESVLLGYNNNNNNNNNNNNNTYENGNNSLIRRSSSSNSNLEVDFNDVFGGPPRRSSLNEARQSLSDLKDWSEEEGEKGWCRWPPEREKPVFGEDSGNRRRHANKNNDFFDDIFGGEESASVCSTPKKRVGEPFTFSRVSSPLPPAADPSATSLPLPFSLPAKLTNGVDLPTFGSPTRSNNINDGILASNGLGLSDSHSSRFSTQRKELKKDFKPYRQSLLSQEFSNSSTSDKADKGGIMKQDISISEVSPSAGNGQFHFSIYKWASKGVPMVMSLRSERASKAKDKVKFERCSSAKEWVGSEISTQKPMAHNGSSVMNNGKEDVSTTSTATENGADSNQIVEQIVSAKAQSHTSCSPQNVTIDVPACSRVVESSTHSADMNGFSGKTEIGRRDTHKLESKPLQFLFKENDKKQDNDQMITREKEENRTKSTKKLSAVFDVTENSMKQEEKKVSVIDVGHSKATSQGSVSLSENTGKGLVKGKVKEFARIFNQETATKPKVDSKSRPQGSTYKQRDALRTKNEVESEPEQSKKENSTIETTNISADNLSRHEDISEAAAIPDISFTVIGDKDESFHGGFMIQVLSQDEGEDLQNQEIQTIDKKIKQWSKGKEGNIRSLLSTLQHVLWTECGWKPVPLVDIIEGNAVKRSYQRALLCLHPDKLQQKGASSDQKYIAEKVFDILQEAWTQFNMLGAL*	704

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu9g02207	703	MobiDBLite	consensus disorder prediction	504	523	-	-
	Lapu9g02207	703	PANTHER	AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED	28	546	-	-
	Lapu9g02207	703	MobiDBLite	consensus disorder prediction	14	52	-	-
	Lapu9g02207	703	MobiDBLite	consensus disorder prediction	316	344	-	-
	Lapu9g02207	703	MobiDBLite	consensus disorder prediction	74	108	-	-
	Lapu9g02207	703	MobiDBLite	consensus disorder prediction	503	558	-	-
	Lapu9g02207	703	MobiDBLite	consensus disorder prediction	419	439	-	-
	Lapu9g02207	703	MobiDBLite	consensus disorder prediction	14	108	-	-
	Lapu9g02207	703	SUPERFAMILY	Chaperone J-domain	592	697	IPR036869	-
	Lapu9g02207	703	MobiDBLite	consensus disorder prediction	524	542	-	-
	Lapu9g02207	703	FunFam	J-domain protein required for chloroplast accumulation response 1	599	702	-	-
	Lapu9g02207	703	Gene3D	DnaJ domain	598	702	IPR036869	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu9g02207	Lapu-Chr9	36777580	36788306	Dispersed/Transposed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lapu9g02207	9	36777580	36788306	Lapu9g02207	9	36777580	36788306	ECH
	Lapu8g00966	8	27805552	27812327	Lapu9g02207	9	36777580	36788306	PCT