Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02201 ATGGCTCCGTGCACCTTATGCGCGCTGTCCAGATTTCATTGCAAGCTTAGATTTGCAGTGGTTGTTTTCGAGATTATATTGATATTGGCGTGGGTGGAGGCCCACAATGCAAATCTCCACGAACACCAACTTCAGGGAGACTTGGAGAGGAATACTAAGAACATTGCCTCTCACTCTTGCATACATGACCAGATTCTTGAACAGAGGAAGCGGCCTGGACGCAAGGTGTATTTAGTTACTCCACAGATTTATGAGCCTAGTCGTTTGAAACACCTTCATCACAAAGGTAGGGCATTACTTGATGTGTCAACTTCATCAAGTTCTCAAGAGGATGCAAAGAAGCCTATTAGGATATATCTAAATTATGATGCTGTTGGCCACTCCCCCGACAGGGATTGTCGAGCAATTGGCGACATTGTTAAACTTGGGGAGCCTCCCATGACTTATCCTCCTGGTTTTCCTTCTTGTGATCCCCATGGAAATCCTCCAATATTTGGTGATTGTTGGTATAACTGCACTTTTGAAGATATCTCAGGAGAGGACAAAAAACATCGCCTTCGTAAGGCATTAGGTCAGGCAGCTGACTGGTTTAGGAGAGCATTGGCGGTTGAACCTGTCAAGGGGAACTTGCGGTTAAGTGGATATTCTGCTTGTGGACAGGATGGAGGTGTGCAGCTTCCTCGTGGGTATATTGAGGAGGGTGTGTCTGATGCTGACTTGGTTCTTTTGGTGACTACAAGACCTACAACTGGAAATACACTTGCCTGGGCAGTGGCATGCGAGCGAGATCAATGGGGTCGTGCTATAGCTGGACATGTTAATGTTGCACCTCGCCATTTGACTGCTGAGGCAGAGACTTTACTTTCCGCAACTCTTATACATGAGGTTATGCATGTTCTTGGTTTTGATCCACATGCCTTTGCTCATTTTAGAGATGAAAGGAAAAGACGGCGTAACCAGGTTACTGAGCAAGTTATGGATGAAAAGCTTGGACGAATGGTAACACGTGTGGTGCTTCCTCGTGTTGTCATGCATTCTCGATATCATTATGCGGCGTTCTCAGGAAATTTTTCTGGTTTAGAGCTGGAAGATGGTGGAGGTCGTGGCACATCAGGATCTCACTGGGAAAAAAGGCTTCTGATGAATGAGATTATGACTGGTTCTGTAGATACAAGATCGGTTGTTTCAAAAATGACATTAGCTCTATTAGAAGATAGTGGATGGTACAAAGCCAACTATAGCATGGCAGACCGTCTTGATTGGGGTCTCAACCAAGGTACCGAATTTGTTACTTCCCCTTGCAATCTTTGGAAGGGAGCCTATCGTTGCAACACAACACAGTTTTCTGGCTGTACATATAACAGGGAGGCAGAGGGATACTGCCCCATCCTGACTTATAGTGGAGATCTCCCTCAGTGGGCTCGGTATTTTCCCCAAGCTAATAAGGGTGGACAATCCTCATTGGCTGATTATTGCACTTATTTTGTTGCTTACTCTGATGGATCATGTACAGACACTAACAGTGCTCGAGCACCTGATAGAATGCTAGGTGAAGTCAGAGGAACTAACTCTAGGTGTATGGCTTCATCACTAGTACGGACAGGATTTGTAAGAGGTTCTATGACCCAGGGAAATGGTTGTTATCAGCACAGGTGTATGAACAAATCTTTAGAGGTTGCTGTGGATGGTATCTGGAAAGTGTGTCCTCTAGCTGGTGGACCCATTCGGTTCCCTGGATTTAATGGTGAATTAATCTGCCCTGCCTACCATGAGCTCTGTAACATTGACCCAGTAGCTGTGTCTGGTCAATGCCCTAATTCATGTAATTTCAATGGAGATTGTGTTGATGGAAAATGCCGATGCTTTCTTGGGTTTCATGGGAATGATTGCAGTAGACGTTCCTGCCCCAGCGAATGCAATGGCAATGGAATGTGTCTTTCCGATGGGATTTGTGATTGTAAACCTGGCCATACTGGCATTGATTGCTCCACTGCTGTGTGTGATGAGCAATGCAGCCTCCATGGTGGGGTTTGTGATAATGGGGTTTGTGAATTCCGCTGTTCTGACTATGCGGGATATACATGCCAGAACAGCTCCATGCTTCTATCTAGTCTTTCGGTGTGCAAAAATGTGCTGGGAAATGATGTTTCTGGACATCATTGTGCGCCCAGTGAGCCTAGCATACTTCAACAGCTGGAAGAAGTAGTTGTCATACCCAACTACCATAGATTATTCCCTGGAGGTGCTAGGAAATTATTTAATATATTTGGCAGCAGCTACTGTGATGAGACTGCAAAACGTCTTGCCTGCTGGATCTCAATCCAAAAGTGTGACAAGGATGGAGATAACAGGCTTCGGGTATGCCACTCTGCATGCGAATCTTATAACCTAGCATGTGGAGCTTCACTTGACTGCTCTGATCAGACCCTTTTCAGCAGTGACGGGGAAGGGGAGGGCCAATGCACGGGATCTGGTGAATTGAAAATGTCATGGTTTAATCGTCTACGAAGCACTTTTTCTTTGAGAAATAGTTCCTTGAAAGGAATATCTGTAAGGTATAGGCAGCTTTAA 2571 0.4531 MAPCTLCALSRFHCKLRFAVVVFEIILILAWVEAHNANLHEHQLQGDLERNTKNIASHSCIHDQILEQRKRPGRKVYLVTPQIYEPSRLKHLHHKGRALLDVSTSSSSQEDAKKPIRIYLNYDAVGHSPDRDCRAIGDIVKLGEPPMTYPPGFPSCDPHGNPPIFGDCWYNCTFEDISGEDKKHRLRKALGQAADWFRRALAVEPVKGNLRLSGYSACGQDGGVQLPRGYIEEGVSDADLVLLVTTRPTTGNTLAWAVACERDQWGRAIAGHVNVAPRHLTAEAETLLSATLIHEVMHVLGFDPHAFAHFRDERKRRRNQVTEQVMDEKLGRMVTRVVLPRVVMHSRYHYAAFSGNFSGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKANYSMADRLDWGLNQGTEFVTSPCNLWKGAYRCNTTQFSGCTYNREAEGYCPILTYSGDLPQWARYFPQANKGGQSSLADYCTYFVAYSDGSCTDTNSARAPDRMLGEVRGTNSRCMASSLVRTGFVRGSMTQGNGCYQHRCMNKSLEVAVDGIWKVCPLAGGPIRFPGFNGELICPAYHELCNIDPVAVSGQCPNSCNFNGDCVDGKCRCFLGFHGNDCSRRSCPSECNGNGMCLSDGICDCKPGHTGIDCSTAVCDEQCSLHGGVCDNGVCEFRCSDYAGYTCQNSSMLLSSLSVCKNVLGNDVSGHHCAPSEPSILQQLEEVVVIPNYHRLFPGGARKLFNIFGSSYCDETAKRLACWISIQKCDKDGDNRLRVCHSACESYNLACGASLDCSDQTLFSSDGEGEGQCTGSGELKMSWFNRLRSTFSLRNSSLKGISVRYRQL* 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02201 856 ProSiteProfiles EGF-like domain profile. 631 663 IPR000742 -
Lapu9g02201 856 FunFam leishmanolysin-like isoform X2 498 593 - -
Lapu9g02201 856 Gene3D - 590 632 - -
Lapu9g02201 856 FunFam Peptidase M8, leishmanolysin 109 299 - -
Lapu9g02201 856 FunFam leishmanolysin-like peptidase isoform X2 310 434 - -
Lapu9g02201 856 FunFam leishmanolysin-like peptidase isoform X2 437 496 - -
Lapu9g02201 856 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 52 816 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Lapu9g02201 856 FunFam SD03917p 592 634 - -
Lapu9g02201 856 ProSitePatterns EGF-like domain signature 1. 651 662 IPR000742 -
Lapu9g02201 856 Pfam Leishmanolysin 170 594 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Lapu9g02201 856 Gene3D - 108 299 - -
Lapu9g02201 856 Gene3D Leishmanolysin , domain 2 309 434 - -
Lapu9g02201 856 Gene3D Leishmanolysin domain 4 498 589 - -
Lapu9g02201 856 Gene3D Laminin 633 700 - -
Lapu9g02201 856 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 110 599 - -
Lapu9g02201 856 Gene3D Leishmanolysin domain 3 437 496 - -
Lapu9g02201 856 PRINTS Leishmanolysin (M8) metalloprotease family signature 397 426 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Lapu9g02201 856 PRINTS Leishmanolysin (M8) metalloprotease family signature 244 273 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Lapu9g02201 856 Pfam EGF-like domain 635 662 IPR013111 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02201 Lapu-Chr9 36708275 36717035 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02201 9 36708275 36717035 Lapu9g02201 9 36708275 36717035 ECH
Lapu8g00932 8 27520677 27530214 Lapu9g02201 9 36708275 36717035 PCT