Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02186 ATGTACACCGCTCCGCACGCAGTAATGCCAACCTTTGCGCCCTTGCCAGAGCCAGACCTCTCCTTAAACATCAGCCCACCCTTCACTTCAGATTCTGACGCTAAACAAGTGGAAACAAGCTGCAACGGATTAACATTAACCACCAAAACGCTTAGCGATATGTGCTCAACCTCGGATTCTGGTAGCAGTGGAAGCGATTTAAGCCACGAAAATGGTTTTTGCCACACCGTCTACAACCTTGGTCATCGTGAACCGACATTGAGCTTAGGCTTCGGAAGGGAAAAATTGAATCCTTATCCTATCCAAGGAGCAGTGTGGAGAAACTTCAATAACCTCCATCACTACCAACCTCATCAGACCAATACCCTTGATTTCAAACGAAATGCTAGAGGCATTCAAGGTTTGAAAAGAAGCTCCAGAGCTCCTAGAATGCGATGGACTACGACCCTGCACGCTCATTTTGTTCATGTGGTTCAGCTTCTTGGTGGTCATGAAAGGGCAACTCCGAAGTCTGTGTTAGAGTTAATGAACGTTAAGGATCTAACTCTAGCTCACGTGAAGAGTCACTTGCAGATGTATAGAACAGTGAAGAGTTCTGACAAAAGCAGCGCAGGTTATGGGCAGATAGGTATAATAGGGTTGAGCCAAAAGCCAGGGATTGTCGATCTGCACGGAGCCTTAGCTTGTGAGAGACCAAATTTGCCAAAGCCGCTGCTAAAATCCCACAGGGCGTCATGGCAAGCATCGATGGAGACAAATTCAATAAATTATATACAGAACCCCATTATCAATTCAGTGTATTCTCATCTCAAAGGAAACCAAACCATGGTGGGTGGACAGCATTATGGAGGTCTGTCGAATTGCATGGAGGAGAAATTGGATTCTTGCTCTTTGTCACGTTCCGATATGACGCTAGACCTAGAATTTACCCTTGGAAGGCCCACTACTTGCAAACAGATCACGCAGAATCAAGAGAATTAA 981 0.4557 MYTAPHAVMPTFAPLPEPDLSLNISPPFTSDSDAKQVETSCNGLTLTTKTLSDMCSTSDSGSSGSDLSHENGFCHTVYNLGHREPTLSLGFGREKLNPYPIQGAVWRNFNNLHHYQPHQTNTLDFKRNARGIQGLKRSSRAPRMRWTTTLHAHFVHVVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSSDKSSAGYGQIGIIGLSQKPGIVDLHGALACERPNLPKPLLKSHRASWQASMETNSINYIQNPIINSVYSHLKGNQTMVGGQHYGGLSNCMEEKLDSCSLSRSDMTLDLEFTLGRPTTCKQITQNQEN* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02186 326 Pfam Myb-like DNA-binding domain 143 194 IPR001005 -
Lapu9g02186 326 SUPERFAMILY Homeodomain-like 139 196 IPR009057 -
Lapu9g02186 326 FunFam Myb family transcription factor 140 198 - -
Lapu9g02186 326 NCBIfam myb-like DNA-binding domain, SHAQKYF class 142 195 IPR006447 GO:0003677
Lapu9g02186 326 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 18 316 IPR044847 GO:0000976|GO:0006355|GO:0010158
Lapu9g02186 326 Gene3D - 141 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02186 Lapu-Chr9 36581372 36585305 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lapu9g02186 Myb_DNA-binding 2.2e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02186 9 36581372 36585305 Lapu9g02186 9 36581372 36585305 ECH
Lapu8g00915 8 27319670 27324483 Lapu9g02186 9 36581372 36585305 PCT