Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02162 ATGTCTGCTCGGAGTGAACACCATACGGTTCCCCTTTCGGTGCTGCTGAAGCGTGAGTTGGCCTACGAGAAAATTGAGAAGCCGGATGTTGTCGTCGTTCACGGCCAAGCCAGTGAGAATAAGAAAGGAGAGGATTTCACGCTGTTGAAGACGGAATGCCAGAGGGTGGTGGGAGATGGGGTTTCTACGTATTCTGTTTTTGGGTTTCTTGTTGTATTTGCATTCTCTGATGTTGAAGTTTTACAGCTATTTGATGGGCATAATGGATCTGCTGCCGCTATTTATACCAAGGAGAATCTTCTGAACAACGTTTTAAGTGCAATTCCTTCTGATCTTAACAGAGATGAGTGGGTTTCAGCGTTGCCTAGGGCTTTGGTTGCAGGGTTTGTAAAAACTGATAAAGATTTTCAAGAGAAAGCACAAACATCAGGAACAACCGTAACCTTCATGATTATAGATGGATGTGTTGTGACAGTTGCATCAGTTGGTGATTCCCGTTGCATACTTGAACCTTATGAAGGTGGGATTTATTACTTGTCAGCAGACCATAGACTAGATAGCAACGAAGAGGAGAGGGTTCGTATCACTTCTAGTGGAGGCGAGGTTGGTCGTCTAAATACAGGTGGAGGCACAGAGGTTGGTCCTTTGAGATGTTGGCCTGGTGGTTTGTGTCTCTCCCGATCCATTGGTGATATGGATGTTGGCGAATTTATTGTCCCTGTACCACACGTAAAGCAAGTGAAGCTTTCTACCGCTGGAGGCAGGATCATTATCAGCAGTGATGGTGTCTGGGATGCTCTAACAGCGGAAATGGCCCTTGATTGCTGTCGTGGCATGTCAGCTGAGGCTGCAGCACCACATATTGTGAAAGAAGCCGTGCAAGCAAAGGGACTTAGAGATGACACGACATGCATCGTTATTGATGTATATCCCCAGGAGAAGCCACCTACTTCTGTGCCAACACAAAAGAAACCGGTAAAAGGAAGGCTTAAGTCCATTTTTCGCAAAAAGTCCTCCGAATCATCATCTTATGCTGACAAACAATACCTGGAGCCGAATGTGGTACAAGAACTATACGAGGAAGGGTCTGCTATGCTTTCCGAGAGGTTGGAAACAAAATATCCACTCTGCAACATGTTCAAGCTGTTTATCTGTGCAGTGTGTCAGGTAGAGATTAAACCTGGGGAAGGTATTTCCATTCACGTGGGTGTGTCTAACCCAGGAAGATTGCGTCCGTGGCATGGACCTTTCCTTTGCTCAAGTTGCCAGGGGAAGAAAGAAGCTATGGAAGGGAAGCGAACATCAGATAGACTTAGCAGCGGAAGTGACTAA 1332 0.4602 MSARSEHHTVPLSVLLKRELAYEKIEKPDVVVVHGQASENKKGEDFTLLKTECQRVVGDGVSTYSVFGFLVVFAFSDVEVLQLFDGHNGSAAAIYTKENLLNNVLSAIPSDLNRDEWVSALPRALVAGFVKTDKDFQEKAQTSGTTVTFMIIDGCVVTVASVGDSRCILEPYEGGIYYLSADHRLDSNEEERVRITSSGGEVGRLNTGGGTEVGPLRCWPGGLCLSRSIGDMDVGEFIVPVPHVKQVKLSTAGGRIIISSDGVWDALTAEMALDCCRGMSAEAAAPHIVKEAVQAKGLRDDTTCIVIDVYPQEKPPTSVPTQKKPVKGRLKSIFRKKSSESSSYADKQYLEPNVVQELYEEGSAMLSERLETKYPLCNMFKLFICAVCQVEIKPGEGISIHVGVSNPGRLRPWHGPFLCSSCQGKKEAMEGKRTSDRLSSGSD* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02162 443 SMART PP2C_4 19 307 IPR001932 -
Lapu9g02162 443 Pfam Protein phosphatase 2C 77 293 IPR001932 -
Lapu9g02162 443 CDD PP2Cc 83 309 IPR001932 -
Lapu9g02162 443 PANTHER PROTEIN PHOSPHATASE 34 308 IPR015655 GO:0004722|GO:0006470
Lapu9g02162 443 SMART PP2C_SIG_2 56 309 IPR001932 -
Lapu9g02162 443 FunFam probable protein phosphatase 2C 12 34 315 - -
Lapu9g02162 443 ProSiteProfiles PPM-type phosphatase domain profile. 58 309 IPR001932 -
Lapu9g02162 443 SUPERFAMILY PP2C-like 75 309 IPR036457 -
Lapu9g02162 443 Gene3D - 59 315 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02162 Lapu-Chr9 36367182 36372724 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02162 1 443 PP2C-type Phosphatase Gene Family AT1G47380 75.225 0.0 693
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02162 9 36367182 36372724 Lapu9g02162 9 36367182 36372724 ECH
Lapu8g00889 8 27076027 27081614 Lapu9g02162 9 36367182 36372724 PCT