Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02133 ATGAGGCAGTGGATACACGTGGCGGTGGCCGCATCCGCCGTGGGATGCGTCTCCACCCTTATGTTGGTCTTCCTCTGGCGTTGGTGTCACAAAAAAAATGGCACGAATTTCGTTGAACCGGCTAGTTTGACCAGGGTGGAGAGTGTGCAGGGAGGGATTTCTGTTTCCAGGCTTCATCAGCAACCTTTTCAGTTGGATCAGGGGAGCAAGAACAGCAACAAGGGTAATTACAGTTACTATGTTTTTCGCGGTGGTGGGGTGTCGGGGAAAAGAAGCTTCTTCAATTGGGGTGATCATCCATCCATGGCCGCCGATGCTGTTGAAAATGGATGGTCACGATTTGCCTTCACGGGGTACAAGAGTTACACGCCGTCTCCTTCGAAAAGATCGGCACTTTTAGGAGCGTGTGCTGCTCCTGGAGGAAGTGATTTTGGGAGAGAATCAGAGGCTGAGATAAGCTGGGAAGTGTCACGTGGATCCGCTGAGTTTATGCAGAAGGTGAGGTTGAATCCTGGTATAAAAAAATCTCAACAAAACAACAATAATGGTTCTCTGGGCGTGGCTTCTATCATTAGAGGGGCTCTGCCTTTGCCTGGGCCTCCTCTGGGGAATTGTGCGTTCCCACAAGAAGCATATTTTGAGATTACCATTTTGTACTCACGTGGCGATGAGTGTGAATCTGTTGGGAAGAATGGGGAAGGTGAGAAGACCAAGCTTTTGGTTCAGGGGAACTCCAATGGTAAAGGGAATTCCGAGGCTTTGGTTCATGTTACCAGTGGGAATGGAAGTAATAAAATCAACAATGTTGAAGGAGAGGGTGGGAAGGGTGAATCTGTGATGTTCTCGTTGGGATTAACAGCAGGGGGTTCTGTTCCTTTGAGAGTTCCCGGTAGCTATCCTGGGAGCATTGGCTTCAACTCCAATGGTTCTCTCTATCTTGATGGAATGAAACTTGTGCGCGAATCAGAGAAGGCAGAGTGGGTGGGAACTGATAGGGTGATTGGTTGCGGATTTGATCCAAGGCAGAAGAAGGTTTTCTTCACTATAGACTCTGATCTAATGCATGTAATTCACTGCCAGACAGAGGAGTTTGGCACACCACTTTTTCCAATCATGGCTGCAAATATAGACATTATGGTGTTAGTTAATTTTGGACAAAGTGCATTTAAATATGCACCTGCCAATGCCCAGAGAACACCAAATCCGTGCTTCATTGCCCCACTTGTAAATTCCCCTGCTGCTACCTTGGGCTATGATGACAGCAGGGAGCTATTCTCAATGGGAAGAATCGATTCCCAGTGGCTCAATCGGTCCACGACCAAAGGAAGCCACAATAATAATAATAATAACCATAACAATAATCGAACATTGGATTTTGACGAGGAGTCTGAGGCTGATCTATTTGAAATCGTCTTAGATGGTTCTGGAAAATGTCCAAACACAGCAGCATCATAG 1455 0.468 MRQWIHVAVAASAVGCVSTLMLVFLWRWCHKKNGTNFVEPASLTRVESVQGGISVSRLHQQPFQLDQGSKNSNKGNYSYYVFRGGGVSGKRSFFNWGDHPSMAADAVENGWSRFAFTGYKSYTPSPSKRSALLGACAAPGGSDFGRESEAEISWEVSRGSAEFMQKVRLNPGIKKSQQNNNNGSLGVASIIRGALPLPGPPLGNCAFPQEAYFEITILYSRGDECESVGKNGEGEKTKLLVQGNSNGKGNSEALVHVTSGNGSNKINNVEGEGGKGESVMFSLGLTAGGSVPLRVPGSYPGSIGFNSNGSLYLDGMKLVRESEKAEWVGTDRVIGCGFDPRQKKVFFTIDSDLMHVIHCQTEEFGTPLFPIMAANIDIMVLVNFGQSAFKYAPANAQRTPNPCFIAPLVNSPAATLGYDDSRELFSMGRIDSQWLNRSTTKGSHNNNNNNHNNNRTLDFDEESEADLFEIVLDGSGKCPNTAAS* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02133 484 PANTHER IMMUNOGLOBULIN SUPERFAMILY MEMBER 5 87 472 IPR043364 GO:0098609
Lapu9g02133 484 SUPERFAMILY Concanavalin A-like lectins/glucanases 294 391 IPR013320 -
Lapu9g02133 484 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Lapu9g02133 484 MobiDBLite consensus disorder prediction 437 457 - -
Lapu9g02133 484 Pfam SPRY domain 212 386 IPR003877 GO:0005515
Lapu9g02133 484 MobiDBLite consensus disorder prediction 437 454 - -
Lapu9g02133 484 Gene3D - 201 399 IPR043136 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02133 Lapu-Chr9 36064483 36067409 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02133 9 36064483 36067409 Lapu9g02133 9 36064483 36067409 ECH
Lapu8g00859 8 26801910 26804253 Lapu9g02133 9 36064483 36067409 PCT