Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02124 ATGGCTTCGGCGAAGGACATGGATCGGATAAAAGGGCCATGGAGTCCCGAAGAGGACGAAGCCTTGCGGAGGTTGGTTCAGACTTACGGCCCCAGAAACTGGTCCCTCATAAGCAAATCCATTCCGGGTCGGTCTGGGAAATCGTGCCGGTTGCGATGGTGCAATCAGCTGTCGCCCGAGGTTGAGCACCGGCCTTTCACGGCGGAGGAAGACGAAGCGATCGTGAAGGCACACGCCAGATTCGGGAACAAGTGGGCCACCATCGCTCGCTTCCTCAACGGCCGCACCGACAACGCCATCAAGAACCATTGGAATTCCACCCTAAAGAGGAAATGCTCCGAACCGCCCTCCGACCCTCGGCCTCTGAAAAGAATCGCCACTGGTTCGGATAGCCCGTCCGGATCCGATTTAAGCGATTCGGGTTTGCCCGCTATATCTCCGACATCTATCTACCAACCTCTTGCAGAGAGCATAAGCGTAAACCTCCTGCCTTCTACCCTGCTTGCGGAAACTGCGTCCTCCTCCGCAACTGATATCGCCACGTCATTGAGTCTGTCTCTACCTGGATCCAATTTGCGCTATGGGGATAGCAACGGGCCCGGGCCTGGAACGAACCAGGAGCCCATTTGCGAGCGGAACCAGGAGATGAGGCTTGGTACGGAGCAGTTCTTCAGTGAAGAGTTGTTAAAGGTTATGCAAGACATGATACGAGTGGAAGTGAGAAATTACATGTGTGGATTGGAACGTAACGGCATGTGTCTGCAAACGGATGCCATTAGAAATGCGGTTATAAAAAGGATGGGAATTGGTAAAATGGTATGGGGAAATTCTGGTAAATTAAATGGGTAA 849 0.53 MASAKDMDRIKGPWSPEEDEALRRLVQTYGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRPFTAEEDEAIVKAHARFGNKWATIARFLNGRTDNAIKNHWNSTLKRKCSEPPSDPRPLKRIATGSDSPSGSDLSDSGLPAISPTSIYQPLAESISVNLLPSTLLAETASSSATDIATSLSLSLPGSNLRYGDSNGPGPGTNQEPICERNQEMRLGTEQFFSEELLKVMQDMIRVEVRNYMCGLERNGMCLQTDAIRNAVIKRMGIGKMVWGNSGKLNG* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02124 282 CDD SANT 65 108 IPR001005 -
Lapu9g02124 282 Gene3D - 10 62 - -
Lapu9g02124 282 FunFam Transcription factor MYB44 65 111 - -
Lapu9g02124 282 SMART sant 10 59 IPR001005 -
Lapu9g02124 282 SMART sant 62 110 IPR001005 -
Lapu9g02124 282 MobiDBLite consensus disorder prediction 106 142 - -
Lapu9g02124 282 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 6 61 IPR017930 -
Lapu9g02124 282 SUPERFAMILY Homeodomain-like 8 104 IPR009057 -
Lapu9g02124 282 MobiDBLite consensus disorder prediction 128 142 - -
Lapu9g02124 282 PANTHER MYB PROTEIN-RELATED 11 152 - -
Lapu9g02124 282 ProSiteProfiles Myb-like domain profile. 58 108 IPR001005 -
Lapu9g02124 282 CDD SANT 13 55 IPR001005 -
Lapu9g02124 282 FunFam MYB transcription factor 11 62 - -
Lapu9g02124 282 Pfam Myb-like DNA-binding domain 14 72 - -
Lapu9g02124 282 Gene3D - 64 127 - -
Lapu9g02124 282 ProSiteProfiles Myb-like domain profile. 6 57 IPR001005 -
Lapu9g02124 282 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 112 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02124 Lapu-Chr9 35953569 35954671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02124 5 272 MYB Transcription Factor Family AT4G37260 45.289 5.18e-80 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lapu9g02124 Myb_DNA-bind_6 1.7e-17 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02124 9 35953569 35954671 Lapu2g00531 2 4557964 4560292 ECH
Lapu9g02124 9 35953569 35954671 Lapu3g01507 3 17689265 17690132 ECH
Lapu9g02124 9 35953569 35954671 Lapu9g02124 9 35953569 35954671 ECH
Lapu8g00848 8 26636696 26637858 Lapu9g02124 9 35953569 35954671 PCT