Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02115 ATGGAGACTCGTGCTGCCTCAAAGAGAAAGGCAAACACTGTGGTCTTGGTCGAAAAACAACACCCCAAAAGACATAGGGTTGTGTTGGCTGAACTCCCCAATTTACCAAATCTTGTTGTCCCCGGAACTCAAAATCCTCCCAAAGAGAAGTTGCATTATGTGAAGGATCTCAATACGAAGAAGCCATCTCGCTCAAGCAACCACTTTTCTTGTACCCACATTGATGAATCTCTTGTCTCCGATGTCTATGAGTATCTCCATGAAATGGAGATGCAGAAAAAGAGGAGACCGATGATTGACTACATCGAGAAAGTTCAGAAAGTAGTTACACCAACCATGAGAGCAATATTGGTGGATTGGTTAGTAGAAGTAGCCGAAGAGTACAAGCTTCTCCACGACACTCTTCATCTCTCTGTTTCGTACATCGATAGGTTTTTGTCGGTTAATCCTGTGACTAAATCGAGACTTCAGTTGCTGGGTGTTTCCTCTATGTTCATTGCTTCAAAATACGAGGAAATGGATCCTCCTGATGTGAACGATTTCTGTAGTATCACTGATCACACATATGACAAGGCAGAGGTTGTTAAGATGGAAGCTGACATACTAAAGTCCCTAAAGTTTGAAATGGGAAATCCGACTATAAACACCTTTCTCAGGAGGTTTGTTGATGTTGCTTCTGATAACCAATCGACTCCAAATTCACAGATTGAATTTTTGGGCGGTTATCTTGCGGAACTAAGTTTGCTGGAGTATGATTGTTTGAGATTTTTGCCTTCTATTGTGGCAGCGTCAGTTGTATTTCTTTCCAGATTTATTATCTCGCCTGAAGTGCATCCATGGACTTCATCTTTGAGTGAATGCTCGGGTTACAGACCTTCTGAGTTGAAAGAATGTGTTCTTATCTTGCATGACCTATATTTGTTACGGAAGGCAGTATCTTTTAAAGCTGTTCGAGATAAGTACAAACAGCAAAAGTTCAAATGTGTGGCAAACCTGCCTTCCCCTCCTTATGTACCGAATTGTTACTTTGAAGACCAATGA 1041 0.414 METRAASKRKANTVVLVEKQHPKRHRVVLAELPNLPNLVVPGTQNPPKEKLHYVKDLNTKKPSRSSNHFSCTHIDESLVSDVYEYLHEMEMQKKRRPMIDYIEKVQKVVTPTMRAILVDWLVEVAEEYKLLHDTLHLSVSYIDRFLSVNPVTKSRLQLLGVSSMFIASKYEEMDPPDVNDFCSITDHTYDKAEVVKMEADILKSLKFEMGNPTINTFLRRFVDVASDNQSTPNSQIEFLGGYLAELSLLEYDCLRFLPSIVAASVVFLSRFIISPEVHPWTSSLSECSGYRPSELKECVLILHDLYLLRKAVSFKAVRDKYKQQKFKCVANLPSPPYVPNCYFEDQ* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02115 346 SMART Cyclin_C_2 212 335 IPR004367 -
Lapu9g02115 346 CDD CYCLIN_AtCycA-like_rpt2 212 326 - -
Lapu9g02115 346 Gene3D - 95 210 - -
Lapu9g02115 346 SMART cyclin_7 216 304 IPR013763 -
Lapu9g02115 346 SMART cyclin_7 119 203 IPR013763 -
Lapu9g02115 346 ProSitePatterns Cyclins signature. 114 145 IPR006671 -
Lapu9g02115 346 Pfam Cyclin, C-terminal domain 212 334 IPR004367 -
Lapu9g02115 346 PANTHER CYCLINS 64 329 IPR039361 -
Lapu9g02115 346 FunFam G2/mitotic-specific cyclin 97 208 - -
Lapu9g02115 346 SUPERFAMILY Cyclin-like 79 209 IPR036915 -
Lapu9g02115 346 SUPERFAMILY Cyclin-like 212 337 IPR036915 -
Lapu9g02115 346 FunFam Cyclin superfamily protein, putative 209 281 - -
Lapu9g02115 346 Gene3D - 81 331 - -
Lapu9g02115 346 Pfam Cyclin, N-terminal domain 81 209 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02115 Lapu-Chr9 35885754 35888423 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02115 3 345 Core Cell Cycle Gene Families AT5G43080 54.467 7.96e-130 373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00844 8 26598670 26602636 Lapu9g02115 9 35885754 35888423 PCT