Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02102 ATGGCGTCCAGTTTTGATAGATGGAAAAAAGATCCTTTCTTTGACGCTGCCGAAGAAGTTCAGGAATCTTCAGACAGGATGGAATCTACCTTTAGAACATGGATTCACTCAATGAGGGATGCATCCAGCCTATGGAACTCTGATGAAGTCCGCCGAGATCTACAAACTGCCCTTGGCACTGCTAAATGGCAGTTGGAGGAATTTGAACGGGCTGCTCGGTCAAGTTATAGCAAAGTTTCAACCGAGGATGCGAGAAATAGGCACCGAGATTTTGTTGCTGCCATCCGTGACAAGATCAGCAAAGTTGAATATTCGTTACAAGAACCCGTTCATTCAGGTAGCAAGGTATCTCTGCCTTGGCCGCGTCTGGATGAAGGAGAACGCGATGAACTAGCATCATTTCTCTCGGGAACATCGGCTTCTATTTGCAAAAACCCTGTTAAATGTATCAGCAGAGATGGTGAAAATCTGCAATTAAGTGACAAAGATTCGTTCCCTAATTGTTCAAGCAATTCACATGTTTCATCCGGGTTGGGTTCGTCTGATGCAGCACAGGAAAAGTCACTTGGGCATCGCAGGGCAGCTAGTGCTGATGCTGATATTGGTTCTTGGAAAATTACTGTTTCTGATTATGCGCAACAATCCAGTTCCTCCAATGGTTCTTCTGGTCTAATTCCTATGCACAAGGTAGCCAGTCTCTCTGGATTTTTTGGTTCCATGGAAACTATCTCTAAGTTGAAGTGGCCTAAGAATGGTTATAGAAAGCTGAAACCAGTAAATCACTGTGAAGAAACGGATAATGCACTATTACCATCAGCTGGATTGAATGGGGGCATCAATACATACTGTGAAGAAAGTAAGACTTGCCTTAATAATAATGATGAATCTTATGAAAAGCAACTCTACGGGTGGTACGGGGCCTTGCAAAGGCAGCTTCAAAGATCTCAATACCAAATGCAATACAATCGGCATGTTCAAATAACTATCTGGGCTGTTATTCTCCTTTGCTTGATTGATTTCTTAGCTTTTATCATACCCTACTTTGAAATTGGTGGAATTTCACCTCCTTCCTCATGTTTTTTATTCTAA 1089 0.4242 MASSFDRWKKDPFFDAAEEVQESSDRMESTFRTWIHSMRDASSLWNSDEVRRDLQTALGTAKWQLEEFERAARSSYSKVSTEDARNRHRDFVAAIRDKISKVEYSLQEPVHSGSKVSLPWPRLDEGERDELASFLSGTSASICKNPVKCISRDGENLQLSDKDSFPNCSSNSHVSSGLGSSDAAQEKSLGHRRAASADADIGSWKITVSDYAQQSSSSNGSSGLIPMHKVASLSGFFGSMETISKLKWPKNGYRKLKPVNHCEETDNALLPSAGLNGGINTYCEESKTCLNNNDESYEKQLYGWYGALQRQLQRSQYQMQYNRHVQITIWAVILLCLIDFLAFIIPYFEIGGISPPSSCFLF* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02102 362 PANTHER OS05G0443700 PROTEIN 1 340 - -
Lapu9g02102 362 MobiDBLite consensus disorder prediction 161 183 - -
Lapu9g02102 362 CDD SNARE_NTD_STX6-like 11 106 - -
Lapu9g02102 362 FunFam Syntaxin 10 8 109 - -
Lapu9g02102 362 Gene3D - 8 108 - -
Lapu9g02102 362 SUPERFAMILY t-snare proteins 10 108 IPR010989 GO:0016020|GO:0016192
Lapu9g02102 362 Pfam Syntaxin 6, N-terminal 11 103 IPR015260 GO:0016020|GO:0048193
Lapu9g02102 362 MobiDBLite consensus disorder prediction 161 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02102 Lapu-Chr9 35791636 35795817 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02102 9 35791636 35795817 Lapu9g02102 9 35791636 35795817 ECH
Lapu8g00840 8 26555571 26559484 Lapu9g02102 9 35791636 35795817 PCT