Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02087 ATGTTGTGCGCTTGTTCTTCCGGTGAGCAGTTCAAATTCGAAGAGCCGCCGCAGTCACCGGACTCCCTCGCCACCAGGGATTTCTCCGCCAGCGGACTCTCTTCCAGGACCACCGGGGAATGGGAACCTAAATTCGATGAAACGCAAGTAGAACAAGCTGAATCTACTCTTAAAGAAGCTCTTTCCTTAAACTATGAGGAGGCCAGGGCTTTGTTGGGGAGACTTGAATACCAAAGAGGGAATTTTGATGCTGCACTTCAAGTGTTTCAGGGTATAGACATCAAGGGTTTGACCCCGAGAATGATCAAGGCTATTGCTGAAAGAACCAAGCAAAGGAAACCACGTTCCAAGGCAGATATCGTGGTTTCAAATGTGATGTCATTGCACTCTGTTAGCCTGCTTCTTGAAGCAATTTTGCTTAAAGCAAGGTCATTGGAGGAACTTGGGGAATGCATTGAGGCTGCAAAGGAGTGCAGAATAATTCTTGATACAGTTGAATCTGCCCTTCCAAATGGAATGCCTGAGGGTCTTGGTGAAGATTGTAAGTTGCAAGAGATGTTTCATAAAGCATTGGAATTACTTCCAAGCCTTTGGATCAAAGCAGGATTCCTGGATGAAGCTGTAGCTGCGTATCGTCGTGCTCTGGTCAAGCCATGGAGTTTGGAGCCACAAAGATTGGCTGCTGTACAAAAGGATTTAGCTACGATACTACTCTATGGTGGTGTTGAAGTTAGCCTATCCTCTCAATTGCAGGCGTGGGGTAAGACGACACCTACCAATAGTGTTGAAGAAGCAATACTTTTGCTAGTAATACTCATGAGCAAGATGGCAATTCGGGAAATAGACTGGGATACTGAAATAATGGATCATCTTACGTTTGCACTTTCAGTCACCGGGATGTTTGAATTACTGGCAGATCATGTAGAGCAGATCCTTCCTGGTATATATAGTCGGGCTGAGAGGTGGTACTTTCTTGCTCTGTGTTTTAGTGCTGCAGGACATGATGAGGTAGCATTGAACCTTTTAAGGAAGGCTTGTGGCAGTTCTGAAGCAAACCATAGACCCCATTTTCCTTCATTTTTGCTTGGAGCAAAACTCTGTTCCCTAGATCCTCGGCATGCTCATGAAGGCATTAACTTTTCACGTAAAGTTCTCGAGCTAGCTAAGAACCAAAATGAGCATTTTCTGAGTCAAGGCCATAAATTTCTTGGCATCTGCTATGGTGCTGCAGCTAGAATTTCTGTACTGGATTCTGATAGAAGTACATTTCAAAGACAGTCTTTGGACTCTCTAAACTGTGCTTCTGTAAATGGAAATGATGACATGGAAGCAATATTCAGCCTTGGACTGGAAAATGCATATCAAAGGAATCTGGATGCAGCTTACAACAACATAATGATGTTCTCAGACATGACTGTTGGCAGTTCAAAAGGTTGGCAGCTGTTAGCGCTTATAGTATCTGCACAGCAGAGGTTTAAGGATGCAGAAACCATAGTTGATTTTGCTTTAGATGAGGCCGGGGGGATGGATCAACTTGAACTTCTAAGATTGAGAGCTGTACTTCAAATTGCTCAGCAGCAACCTAGGCAAGCAATAGAGACATATAGGATCTTGCTTGCACTAATTCAAGCAAAAAAGGAGCATTGTCTTCAAGATAACAACATTGATCGAGAACAAGCATTCAGACATGAGGAGGTAACAGAAAGGAAGTTGGAAATGGAAGGCTGGCAAGATTTGGCTACCATTTATGCCGATATTGGTTCCTTTCTTGATGCAAAAACTTGTGTTGACAAGGCCCAATTGATAGAATTTTTTTGTCCAAGAAGTTGGCATATTACAGGGGTTGTGCTTGAAGCTCAATCATTATACAGAGAGGCATTTGTTTCCTTTTCAATATCATTGTCAATAGAACCAGATTACACTCCCAGTATCATTTCTACTGCAGAACTATTGATGAAACTTGGTATGCAATCACTTCCTATTGCAAGAAGTTTTTTAATGAATGCTTTACGATTAGAACCTAGAAACCATGATGCTTGGTTCAACCTTGGATTGGTTTCAAAAATGGAGGGTTCATCACAGCAAGCAGCAGAGTTCTTTCAAGCTGCTTATGAGCTGAAGCTTTCTGCTCCAGTGCAAAAATTTAAGTAA 2151 0.4254 MLCACSSGEQFKFEEPPQSPDSLATRDFSASGLSSRTTGEWEPKFDETQVEQAESTLKEALSLNYEEARALLGRLEYQRGNFDAALQVFQGIDIKGLTPRMIKAIAERTKQRKPRSKADIVVSNVMSLHSVSLLLEAILLKARSLEELGECIEAAKECRIILDTVESALPNGMPEGLGEDCKLQEMFHKALELLPSLWIKAGFLDEAVAAYRRALVKPWSLEPQRLAAVQKDLATILLYGGVEVSLSSQLQAWGKTTPTNSVEEAILLLVILMSKMAIREIDWDTEIMDHLTFALSVTGMFELLADHVEQILPGIYSRAERWYFLALCFSAAGHDEVALNLLRKACGSSEANHRPHFPSFLLGAKLCSLDPRHAHEGINFSRKVLELAKNQNEHFLSQGHKFLGICYGAAARISVLDSDRSTFQRQSLDSLNCASVNGNDDMEAIFSLGLENAYQRNLDAAYNNIMMFSDMTVGSSKGWQLLALIVSAQQRFKDAETIVDFALDEAGGMDQLELLRLRAVLQIAQQQPRQAIETYRILLALIQAKKEHCLQDNNIDREQAFRHEEVTERKLEMEGWQDLATIYADIGSFLDAKTCVDKAQLIEFFCPRSWHITGVVLEAQSLYREAFVSFSISLSIEPDYTPSIISTAELLMKLGMQSLPIARSFLMNALRLEPRNHDAWFNLGLVSKMEGSSQQAAEFFQAAYELKLSAPVQKFK* 717
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02087 716 MobiDBLite consensus disorder prediction 5 46 - -
Lapu9g02087 716 SUPERFAMILY TPR-like 49 391 IPR011990 GO:0005515
Lapu9g02087 716 PANTHER PROTEIN NPG1 1 716 IPR043376 -
Lapu9g02087 716 MobiDBLite consensus disorder prediction 22 38 - -
Lapu9g02087 716 SUPERFAMILY TPR-like 573 707 IPR011990 GO:0005515
Lapu9g02087 716 Pfam Tetratricopeptide repeat 49 91 - -
Lapu9g02087 716 Gene3D Tetratricopeptide repeat domain 38 255 IPR011990 GO:0005515
Lapu9g02087 716 Gene3D Tetratricopeptide repeat domain 263 541 IPR011990 GO:0005515
Lapu9g02087 716 SUPERFAMILY TPR-like 47 535 IPR011990 GO:0005515
Lapu9g02087 716 SMART tpr_5 512 545 IPR019734 GO:0005515
Lapu9g02087 716 SMART tpr_5 319 352 IPR019734 GO:0005515
Lapu9g02087 716 SMART tpr_5 607 640 IPR019734 GO:0005515
Lapu9g02087 716 SMART tpr_5 476 509 IPR019734 GO:0005515
Lapu9g02087 716 SMART tpr_5 677 710 IPR019734 GO:0005515
Lapu9g02087 716 ProSiteProfiles TPR repeat profile. 677 710 IPR019734 GO:0005515
Lapu9g02087 716 Gene3D Tetratricopeptide repeat domain 553 658 IPR011990 GO:0005515
Lapu9g02087 716 Coils Coil 58 78 - -
Lapu9g02087 716 Gene3D Tetratricopeptide repeat domain 659 712 IPR011990 GO:0005515
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lapu9g02087 Lapu-Chr9 35655912 35659395 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02087 1 715 Calmodulin-binding Proteins AT1G27460 59.666 0.0 862
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02087 9 35655912 35659395 Lapu9g02087 9 35655912 35659395 ECH
Lapu8g00822 8 26375552 26379746 Lapu9g02087 9 35655912 35659395 PCT