Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01330 ATGGCCCTGTCAACTCCACACATGCAAAGATTCCTCTTATGCAAGCTCCATACTCGCTCCATCTCTAAGAGCACACACAGAAACAGCTTCAGCACCACTAGCAGGGGCCGATGCTGCTCTGCCATAGCCATTGATGCTCCATCGTCTTTGACTGAGGTGCCCGGTGTAAGATGGGGGTCCATAGCGTTGCAGGGTCTCCGTGAAGAGATGGAGGATGACATCATTGTTCGACCCGATGGCCTTCAGGGCTTCTCTTTCGCGGCTGTCTTTGATGGCCATGGAGGGTTTTCTTCTGTCGAGTTCCTCAGGGATGAGCTGTACAAGGAGTGTGTTGAAGCTTTACAAGGTGGATTATTATTAGTGCAGAAAGATTTCAAAGCCATTAAAGGAGCATTGCAGGAGGCATTTCTCAAGGCAGACACGAGGTTATTAAAACAGCTTGAAGTGAATGGAGAGGAGGATGAATCAGGTGCTACAGCAACTGCCGTTTTCATCGGAGATGATGATCTTCTAATTTCACATATCGGTGACTCGTCTGCGGTTTTATGCAGATCTGGAAAAGCCGAAGTTCTGACCAGTCCTCACCGTCCATATGGGAGCAACAAAACTTCTCTTGATGAAATTAGAAGAATCAGAGAAGCAGGTGGATGGATTAGCAATGGTAGAATTTGTGGAGACATTGCTGTATCTCGTGCATTTGGGGACTTGCGATTCAAAACAAAGAAGAACGAGATGCTACAAAAAGGAGTTCAGGAAGGAAAATGGTCAGCAAAGTTCATCTCTCGTGTACAGCTCAACAATGACTTGGTTGTAGCATACCCTGATATTTATCAGGTAGCTCTTGGCTCAGATGCAGAATTTATAGTATTAGCATCCGACGGCTTATGGGATTACATGAGCAGCTCAGAAGCAGTTTCTTTAGTGAGGGATCAACTTCGAAAACATGGAAACATTCAGCTAGCATGTGAATCGCTTGCAGAAGCCGCATTGGACCGACGTACACAGGATAATGTCAGCATTATAATTGCTGATTTAGGTCGGACAGACTGGCAGAATGTGCCACTGGAGCAACAAAATACCATAGTTGAGCTTGTTCAAGCTCTTGCTACCATTGGAATTGTGTCTTTTGGAATCTGGTTTTCATCACAGCTTTCTTTATAG 1161 0.4539 MALSTPHMQRFLLCKLHTRSISKSTHRNSFSTTSRGRCCSAIAIDAPSSLTEVPGVRWGSIALQGLREEMEDDIIVRPDGLQGFSFAAVFDGHGGFSSVEFLRDELYKECVEALQGGLLLVQKDFKAIKGALQEAFLKADTRLLKQLEVNGEEDESGATATAVFIGDDDLLISHIGDSSAVLCRSGKAEVLTSPHRPYGSNKTSLDEIRRIREAGGWISNGRICGDIAVSRAFGDLRFKTKKNEMLQKGVQEGKWSAKFISRVQLNNDLVVAYPDIYQVALGSDAEFIVLASDGLWDYMSSSEAVSLVRDQLRKHGNIQLACESLAEAALDRRTQDNVSIIIADLGRTDWQNVPLEQQNTIVELVQALATIGIVSFGIWFSSQLSL* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01330 386 FunFam Protein phosphatase 2C 57 56 352 - -
Lapu9g01330 386 CDD PP2Cc 64 345 IPR001932 -
Lapu9g01330 386 SMART PP2C_4 47 343 IPR001932 -
Lapu9g01330 386 ProSitePatterns PPM-type phosphatase domain signature. 86 94 IPR000222 GO:0043169
Lapu9g01330 386 ProSiteProfiles PPM-type phosphatase domain profile. 57 345 IPR001932 -
Lapu9g01330 386 Gene3D - 56 352 IPR036457 -
Lapu9g01330 386 SUPERFAMILY PP2C-like 49 346 IPR036457 -
Lapu9g01330 386 Pfam Protein phosphatase 2C 59 338 IPR001932 -
Lapu9g01330 386 PANTHER PROTEIN PHOSPHATASE 2C 37 343 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01330 Lapu-Chr9 27431128 27437116 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01330 9 27431128 27437116 Lapu9g01330 9 27431128 27437116 ECH
Lapu9g01330 9 27431128 27437116 Lapu8g00917 8 27342449 27344030 PCT