Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01017 ATGGCTCTCCTAACTTCCTTGCCTGAACACTCCACCACCCCCAAACGACACAAACGAAAACCTCAGCAGCAGCAACAACAGCAGCAACACCAGAAGCAGAAGCAGAAGCAGAAGCAGAAACAGAAACAGAAACCACACTCTTCATGGGATCAAATCAAGAACCTGTTAACCTGCAAACAGATGGAAGGGTCGAGGGTTCACGACCCTTCCAAAGGGTACTCGAAGATAGGGTCTTCTTGCAGTTCCATATGCAGCTTCAGAGACGTTGTTCATGGGAACACACGTGTGGTGCATAGGTCTGATAACTCTTCACCAGAGAGTAGTTCTCTGGGTCAGGAAACTGGTTTACTCTCTAGGAAACCGGTAACCGCTTCTACTCGCTCCACACCTGCAAAACCAAACGCTGGACCAACCTACACGTCATCATCATCTTCCAGGGGAATGCAATTCAGAAAGCTATCTGGCTGTTATGAATGTCACATGATCATTGACCCTAGCAGGTTACCAGTTGCAAGGAGCACTGTGTGTGCTTGCTCTCACTGTGGTGAGGTCTTCCCTAAAATGGAGAGTTTGGAGCTTCATCAAGCTGTTCGTCATGCCGTTTCGGAGCTGGGTCCTGAGGATTCGGGTAGGAACATAGTGGAAATAATATTCAAATCGAGCTGGTTGAAGAAGGATAATCCGATATGCAAGATCGAACGGATACTGAAAGTGCACACTACTCAACGCACCATCCAACGGTTCGAAGACTGCAGGGACACGGTAAAGAACCGTGCGCTGAGCAGCACCAAGAAAAATCCCAGGTGCGCAGCGGACGGCAACGAACTCTTGCGGTTCCACTGCACCACCTTAACGTGCGCACTGGGCGCACGTGGGTCATCCTCGCTGTGCGCCTCCGTACCCGGCTGCGGTGTCTGCACAATCATCAGGCACGGTTTCCAAGGTAGCGTAGGCGGAGGCGACCACGCGAAGGCCAAGGGCGTCAGGACCACCGCCAGCAGCGGTAGGGCCCACGACTCCGTCGTCTGCGGCGACGGCACGCGGAGGGCCATGCTGGTGTGCCGGGTGATCGCAGGGCGCGTGAAGCGCGTGGCGGAGGAAGCGCCGCCGTCGGAGGAGGAACACGTGTCGGCTGCGTCCTATGATTCCGTAGCCGGGTACGCTGGAATCTACTCGAATCTCGAGGAGTTGGTTGTCTTCAATCCAAAGGCTATCCTTCCTTGTTTCGTGGTAATTTATAAAGTGCCTCCGTCTTAG 1257 0.5362 MALLTSLPEHSTTPKRHKRKPQQQQQQQQHQKQKQKQKQKQKQKPHSSWDQIKNLLTCKQMEGSRVHDPSKGYSKIGSSCSSICSFRDVVHGNTRVVHRSDNSSPESSSLGQETGLLSRKPVTASTRSTPAKPNAGPTYTSSSSSRGMQFRKLSGCYECHMIIDPSRLPVARSTVCACSHCGEVFPKMESLELHQAVRHAVSELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHTTQRTIQRFEDCRDTVKNRALSSTKKNPRCAADGNELLRFHCTTLTCALGARGSSSLCASVPGCGVCTIIRHGFQGSVGGGDHAKAKGVRTTASSGRAHDSVVCGDGTRRAMLVCRVIAGRVKRVAEEAPPSEEEHVSAASYDSVAGYAGIYSNLEELVVFNPKAILPCFVVIYKVPPS* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01017 418 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 47 413 - -
Lapu8g01017 418 Coils Coil 23 43 - -
Lapu8g01017 418 SUPERFAMILY ADP-ribosylation 201 415 - -
Lapu8g01017 418 Gene3D - 200 415 - -
Lapu8g01017 418 ProSitePatterns Zinc finger C2H2 type domain signature. 176 199 IPR013087 -
Lapu8g01017 418 FunFam C2H2-like zinc finger protein 200 414 - -
Lapu8g01017 418 ProSiteProfiles Zinc finger C2H2 type domain profile. 176 204 IPR013087 -
Lapu8g01017 418 MobiDBLite consensus disorder prediction 97 146 - -
Lapu8g01017 418 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01017 Lapu-Chr8 28288823 28292129 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lapu8g01017 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g01017 8 28288823 28292129 Lapu8g01017 8 28288823 28292129 ECH