Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01007 ATGGGTTCAGTTTCTCTGAAAATTGGAGATGGAACAGCCAGATTCCAAAGAGCAACACTGTGTTCTTCAGCTGTTAACATTCTCATGATTTTCTCTGTCATCACCACCAACCTCTTTGCTCTCTATGCCTTCACTGCTTCCCCTAAACACCCCCATCACCTTCTCCACCATCATGCTCACAAGAACATTTCTCTCATCTCGGAGCAGGTCTCTCTCATTCTCAGAGAGATCGATTTATCCCAGAAGAAACTGGCCCAGATGGAGAAAGAGCTTCTGGGCTACGAAAGCATTGATCTTTCAAGGCCCAACATTGCATCCGAGCTCAAACTCTTCCTGCAGCGCCACCAGCTTCCCCTGGGGAAAGACTCAAGAACTGGGATCACTGAGATGGTGCCATCTGTGGGCCACACCTGTGAGAAAAATTCAGACTTGCTGTCTCAGTTCATGAATTACAAGGTTTTTGGAGCTTGCCCTGATGATTGGAGTGTGGCACAGAAGCTGATCTTGAAAGGGTGTGAACCTTTGCCTAGGAGGAGGTGTTTTGCGAAGACTTTTTCCAAGGTAGGTTTGTATCCATTTCCAGATTCTCTTTGGAAGCCTGTTGGTAATAAGACTGTTAACTGGAGCGGTCTTGGTTGTAAGAACTTTGAGTGTTTGAATGGTAAGAAGTTGAGTAGGGAGTGCATTGGTTGCTTTGATTTGGTCCATGGCACTGAGAATGTTAGGTTTGTTAAGGGTAAGAGTAAGAATGATTTTCTAGTTGATGATGTGTTGGCCTTAGGAGGTGGAGGGGTTAGAATAGGGCTTGACATTGGTGGAGGGTCTGGATCATTTGCTGCCAGAATGGCTGACAGGAATGTTACTGTGGTTACTAACACTCTCAATGTTGATGCCCCATTCAGTGAGTTCATTGCTGCAAGAGGGCTTTTTCCTCTTTACTTGAGCTTGGATCATAGGTTTCCTTTCTATGACAATGTTTTTGACTTGGTTCATGCTTCAAGTGGCTTGGATGTTGGAGGAAAGAGTGAGAAATTGGAGTTTTTGATGTTTGACATTGATAGAGTTTTGAGGGCAGGTGGTTTGTTCTGGCTGGATAACTTCTTTTGTGCCAATGAAGAGAAGAAGCAAACTTTGACTCGGTTGATTGAAAGGTTTGGATATAAGAAGTTGAAATGGGTTGTGGGAGAGAAGGTTGACAGTGTTGGCTCTGGCAAACCTGAAGTTGTGTTATCTGCTGTCCTTCAGAAACCTGTTAGAGTTTAG 1263 0.4442 MGSVSLKIGDGTARFQRATLCSSAVNILMIFSVITTNLFALYAFTASPKHPHHLLHHHAHKNISLISEQVSLILREIDLSQKKLAQMEKELLGYESIDLSRPNIASELKLFLQRHQLPLGKDSRTGITEMVPSVGHTCEKNSDLLSQFMNYKVFGACPDDWSVAQKLILKGCEPLPRRRCFAKTFSKVGLYPFPDSLWKPVGNKTVNWSGLGCKNFECLNGKKLSRECIGCFDLVHGTENVRFVKGKSKNDFLVDDVLALGGGGVRIGLDIGGGSGSFAARMADRNVTVVTNTLNVDAPFSEFIAARGLFPLYLSLDHRFPFYDNVFDLVHASSGLDVGGKSEKLEFLMFDIDRVLRAGGLFWLDNFFCANEEKKQTLTRLIERFGYKKLKWVVGEKVDSVGSGKPEVVLSAVLQKPVRV* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01007 420 Coils Coil 70 90 - -
Lapu8g01007 420 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 24 419 - -
Lapu8g01007 420 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 247 390 IPR029063 -
Lapu8g01007 420 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 261 387 IPR004159 GO:0008168
Lapu8g01007 420 Gene3D Vaccinia Virus protein VP39 251 401 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01007 Lapu-Chr8 28172168 28173852 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g01007 8 28172168 28173852 Lapu8g01007 8 28172168 28173852 ECH
Lapu8g01007 8 28172168 28173852 Lapu9g02283 9 37404858 37406884 PCT