Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01002 ATGAAACAAACGTTTTCTATCCTCTTCACAACTCTCCTCCTCGCACTCACACTCCCGCCGCCGTTTTCCCTCGTCGCAAGCGGCGTCGGCCAGTGGCAGCTTCTCCAGAAAAGCATCGGCATTGTCGCCATGCACATGCAGCTCCTCCACACCGACACCGTCCTCATCTTCGACCGCACCGACTTCGGCCTCTCCAACCTCTCCCTCCCCGGCGGCCGCTGCCGCCACGACCCTAACGAAAAGGTCGTCAAAACAGACTGCACCGCCCATTCCATAGAATACGACGTCGCCTCCAACACCTTCCGCGCCCTCTTCCTCCAAACCGACATCTGGTGCTCCTCCGCCTCCGTCGCCGCCGACGGCACGCTGGTTCAAACCGGTGGCTTCAATGACGGCGACAGAGCCGTGCGAACATTCTCCCCGTGCGCCACTTGCGACTGGAAAGAAATCCCCGACGGCCTCGCCGCGCGTCGCTGGTATGCCACCAACCAGAAACTCCCGGACGGGCGCCAAATCATCATCGGCGGCAGAAGACAATTCAACTACGAGTTTTATCCTAAAACCTTTGCCAATGCCAAAAACACATACTCCTTACCTTTCCTCGTTCAAACCAGAGATCCTTCCGAAGAAAATAACCTCTACCCTTTCGTTTTCCTTAACGTTGATGGCAACCTCTTCATCTTCGCCAACAACAAAGCCATTCTCTTAGACTACACCAAAAACGCCGTCGTTAAAACGTTCCCCAACATTCCCGGTAACGAGCCCAGGTGTTACCCAAGCACCGGTTCCGCGGTTCTCTTACCCTTACGTAATAAAAACCCACACTTTGCTTTTTCCGAAGCTGAGGTTTTAATCTGTGGCGGAGCCCCGAGAGGGGCTTATACTCAAGCCAAAAAGGGTAAATTTATCGGAGCTTTAAATACTTGTGCCCGGATTAAAATAACAGACCCGAATCCAACCTGGATCATGGAGACAATGCCCGGAGGTAAAGGTAGACTCATGAGCGACATGATTCTTCTTCCAAACGGCAACGTTTTGATTATTAACGGTGCGGGTTCCGGTAGCGCTGGTTGGGAATATGGGCGAGACCCGGTTCTTGCTCCGTTTATTTATAACCCGGATAAGGAACCCGGGTCTAGGTTTGAGATACTTACCGCCACCAATACTCCGCGAATGTATCACTCAAGTGCGATTTTGGTTCGTGATGGGAGGGTTCTGGTTGCGGGGAGTAACCCTCACGTGGGCTACAAGTTCTCGCACGTGATTTTCCCCACCGAGCTTGGCCTGGAAGCGTTCTCGCCGCCGTATTTGGAAACGGCGTATGATCACGTGCGTCCCAGAATCGTTGGTCCGGAGTCGGGGACGAGGGTAGCGTACGAGCAGAAGGTGAAGGTTCGGGTCGACGTGGTGGGTGGGGCTTTGGTTCGGAGTTTGGTGAGGGTGACGGTGCTGGCGCCGCCTTTTACAACGCACTCGTTTTCGATGAATCAGAGGATGCTGGTGCTCGAACCTAGCAACGTGACAAACGTGGATGGACAAACAACGTTTGAGATTGAGGTTACAACACCGGGTTCGGCCGTTATTGCACCACCCGGTTTTTATCTTCTGTTTGTGGTCCACCAAGAAATACCAAGCAAGGGAATTTGGATCCAAATACTTTAA 1662 0.5325 MKQTFSILFTTLLLALTLPPPFSLVASGVGQWQLLQKSIGIVAMHMQLLHTDTVLIFDRTDFGLSNLSLPGGRCRHDPNEKVVKTDCTAHSIEYDVASNTFRALFLQTDIWCSSASVAADGTLVQTGGFNDGDRAVRTFSPCATCDWKEIPDGLAARRWYATNQKLPDGRQIIIGGRRQFNYEFYPKTFANAKNTYSLPFLVQTRDPSEENNLYPFVFLNVDGNLFIFANNKAILLDYTKNAVVKTFPNIPGNEPRCYPSTGSAVLLPLRNKNPHFAFSEAEVLICGGAPRGAYTQAKKGKFIGALNTCARIKITDPNPTWIMETMPGGKGRLMSDMILLPNGNVLIINGAGSGSAGWEYGRDPVLAPFIYNPDKEPGSRFEILTATNTPRMYHSSAILVRDGRVLVAGSNPHVGYKFSHVIFPTELGLEAFSPPYLETAYDHVRPRIVGPESGTRVAYEQKVKVRVDVVGGALVRSLVRVTVLAPPFTTHSFSMNQRMLVLEPSNVTNVDGQTTFEIEVTTPGSAVIAPPGFYLLFVVHQEIPSKGIWIQIL* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01002 553 PANTHER SECRETED PROTEIN-RELATED 27 552 - -
Lapu8g01002 553 CDD E_set_GO_C 441 552 IPR015202 -
Lapu8g01002 553 Gene3D - 26 442 IPR037293 -
Lapu8g01002 553 Pfam Glyoxal oxidase N-terminus 44 288 IPR009880 -
Lapu8g01002 553 SUPERFAMILY E set domains 441 552 IPR014756 -
Lapu8g01002 553 Gene3D Immunoglobulins 444 553 IPR013783 -
Lapu8g01002 553 Pfam Galactose oxidase-like, Early set domain 445 552 IPR015202 -
Lapu8g01002 553 SUPERFAMILY Galactose oxidase, central domain 78 438 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01002 Lapu-Chr8 28115050 28116711 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g01002 8 28115050 28116711 Lapu8g01002 8 28115050 28116711 ECH
Lapu8g01002 8 28115050 28116711 Lapu9g02277 9 37352897 37354558 PCT