Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01001 ATGGAGGGAGAGGATATTAGGTCTGGGACCAGGAAGAAGCGATCCAAGAAGGAAATTGGTTTTGACTCTGACGACGACGAGCCCATTGGGTCCATCTTTAAGCTAAAGAGGTCCAAGAGGAAGGGTAGTGCTAGTGGTGATGCTGTTAGGGAGAAGGAGGATTTCGGGGGTATGGATGATAATGATACCTTGGCTAGCTTTAGGAAGAGATTGAAGGGTCCTAAAAGAGATCAGGGATCTGGGGTTGCAAGAGGAGCAACTCCTGCTTTGCTTGTGTCTGATGAAGATTTGGTTGGTTTGGGAGCTAAGGGTAAGGATGAGAAAGGGCTGGCCTTGGTGCCTGGTGGTGAGGACATGCAGATGCAGGATTCTTCTGATCAGCACATGGAGGATTCGTTGTCTACGATTTTTCACAAGGCACAGTCTAGTTCTGCTAGGAAATCTCGTGGGGGTTCGAGGCAGAAAAGGGGGATTCAGAAGGTGGATAGTGGGTTGAGCCCTGCAGGTTTTGTGGAAGCCGTGGATTCTGTGGATTTAGTGGTTGAAAGTAGATCCGGATCTGCTTCTGGCTCGAAATTGGTTGGGGGGAATGCCATGTCTGATGATGCTTTGCCTCAAGCGTCTGAACCGGTTGTCACATCTGTGGTGGAGGATCATAAGTGTGTTAATGACTGTTTTCAAGAGGAAATTCCGAAGGGTGAATGTGATTTGGACATTCCAGATGGACCAAATCAGTCAAATGATGTCTGCCGTGAAGATGGGAAGCAATTTTCTAGTGCTGTACAAGTTCAAGATATTTCTTGTGATTCTGACCAGAAGGTTGCATTGCAGGAAAGTGTTATTAGTGATGGTTTACATAAGTTATCTTCCGTGTTACATGATGAAATAGTTGACAGTGCCTCTCTCTCAAAAGTGGTGGAAGGGGAAAGGCAATTTACTGAGTTTGGAGAGTTTGAGAATAGATTGACTGATGAGCTAGTACAAGAGTGCAACAGTGCTTCAGAACACGATGCTTCTACTTCTATAGGGAAAGAAAATGTCTTAACATCTTGGCACACTGAACCCTTGATTAAATCAACTGAAAGTATATTGAAAGAGAGTAATGATATGGTTTCTGGAAAAGGTTTTCAGGAAAGTAATGGAGCTCTAGAGTTATCTGGATGCCTTATGGAAGTAGATGGAGGTGGAAAACCAGAATCTGAGTTTGTTTGTGATAGAAATTTCTGTGATTATAGTAATTTAGATACAAAGGTTGAAGTGCAAGATTTTGTTATAGGTTTTTCACCTAAGAGAAATGATGTAACTGTCAGTGGTTCTTCTATGGTGTCTAATGAAGCTGAATTGGCTGCCTGCTCAAATCACCTGGAGAAACCTGTAGAAGCTTGCAATATTCCCCAAAACCCCACTGCTTCAATTCTGAAATGTAGCTCGGTTTTAGATCCTATTCAATCGGATGGATCCTCTCTTCAATCTTCAATTCCAGATGAAAATGGGAACTCTGCAGAATACCATGCCTCTGTGTCTGATTTTGTCGATAACGATGGTAAGATATCAAGCATTCAACGGGTGGTGCGGAAGACTAAAATGCGTAAGCATGGAGACATGACATATGAGGGGGATGCTGATTGGGAGGTTTTGATTAATGATCAAGCTCTAAATGAAAGTCAAGTTATGACAGATGTTGACCGCACACTTAGAACAAGAATGAAGCATGATTCCTCTTTGAATACTGGTGACGACTCTGAAAATGTTGCAGTAGTAGCGGTATCAGCTGGGCTGAAAGCCCGTAAAGCTGGTCCAATTGAGAAAATAAAGTTTAAAGAGATCTTGAAGCGAAAAGGTGGTCTCAAGGAATATTTGGATTGCAGAAATCAGATTTTATGTCTTTGGAGCAGAGATGTCACACGTATTTTGCCCCTTACTGAATGTGGAGTTAGTGATACTGATTCTGAGAATGGAAGTCCTCGTTCTTCTCTTATTAGGGAGGTCTATGGGTTTCTCGATCAATATGGTTATATAAATGTTGGAATTGCCTCCCAGAAAGAGAATGTTGGAAGTAGTGCAAGGCATTGTTATAAACTGGTAAAAGAAAAAGGTTTTGAGGAAAGTCTTGCTGCTTCGATGGCTGACTCTGAAGATGGAGTTTCCTTTCTTGTTGGCCAGACCAAAATGTCAGATACTTCCAATGAGATTAACAATGGTCTAACTAAGGATTGCAATGACCTAACAACTGAACCTACTGAAGGCACGGGGCACAGTAATGAAGTGAAGGTGGATTTATCAAACATATCACAACAGGCAGAAGGAAAAAATCTTGATTACCAGGAAAATGATGGGTTACAGGATGGAACTATACATGTCAGTATTGACAGTTCTGTTCCTTCTTCCAACTTTGCTGATTGCAGATTAACTTCTCTGGTAGCTAAAGAGAAAAGCAGTGACTCTACCTGCATTAAATCTGTTTGGGGTGGTCAGGTAGGTGACATTCTGCAGTCAGATTTAGATCCTAGAAAGAGAGTAATTGTCATTGGAGCTGGGCCTGCCGGGTTAACTGCTGCTCGCCACTTGCAACGTCAGGGATTTCCTGTAACTGTGCTTGAGGCTAGGAGTAGGATAGGAGGTCGTGTGTTTACTGATCACTCCTCACTTTCTGTCCCTGTTGATCTCGGTGCTAGCATTATAACTGGTGTTGAGGCTGATGTGGCCACAGAGAGAAGACCAGATCCTTCCTCATTGATTTGTGCTCAGTTGGGCCTTGAGTTGACGGTGTTGAACAGTGATTGCCCTCTTTATGACATAGTGACAGAACAAAAGGTTCCTGCAGATATGGATGAAGCACTTGAAGCTGAATATAATAGCCTTATAGATGACATGGTATTGGTTGTCGCTCAGAAAGGTGAACAAGCAATGAGAATGTCTCTTGAAGATGGTTTAGAATATGCCCTCAAGATTCGGCGAATGGCACGCTCTGAAAGCAGTGATGAAACTGAACAAAATAAGTCTGCAGATATACCATTTGATTCCAAAAATGACAGTACTGTGGAAAAAAAACTTGATGAGGAGATTTTGAGTCCTCAGGAGAGGAGGGTTATGGATTGGCACTTTGCTCATTTGGAATATGGTTGTGCTGCTTCACTTAATGATGTTTCTCTTCCCTACTGGAATCAAGATGATGTGTATGGAGGTTTTGGGGGAGCTCATTGTATGATCAAAGGGGGTTACAGTTCTGTTGTTGAGTCTCTGGGAGAAGGAATTTCAATTCACTTGAATCATGTCGTAACAAATGTGTCATATGGTATCAAGGAACCTGGTCAGAGTTATAAAGTCAAAGTTTCTACATCAAATGGCAATGAGTTCTTTGGCGATGCTGTCCTTGTTACTGTTCCACTTGGCTGTTTGAAGGCTGAAACCATACAATTCTCCCCACCTTTGCCACCATGGAAATGTTCTTCTGTTCAGCGTCTTGGTTATGGAGTTCTAAATAAAGTGGCTTTGGAATTTCCTAGTGTATTTTGGGATGATGCCGTGGATTACTTTGGAGCAACAGCAGAGGAGAGAAACAGTAGAGGACACTGCTTTATGTTCTGGAATGTCAGGAAAACAGTAGGGGCTCCTGTCCTTATTGCATTAGTGGTTGGTAAGGCAGCCATTGATGGTCAAAGCTTGAGCTCTTCCGATCATGTTAAACATGCATTGAAGGTTCTCCGAAAACTTTTTGGGCAGGATTCAGTTCCAGATCCTGTTGCCTCGGTTGTGACTGATTGGGGTAGGGATCCTTTTAGCTATGGTGCTTATTCTTACGTTGCGGTTGGGGCCTCAGGAGAAGACTATGATATATTAGGGAGACCAGTTGATAACTGCTTATTTTTTGCTGGTGAAGCAACCTGCAAAGAGCACCCAGATACTGTTGGTGGTGCAATGATGAGTGGACTACGGGAGTCTGTTCGAATAATTGACATATTGCGCTCTGGAAACGATTATATTGCTGAGGTGGAGGCATTGGAAGCTGCTCGGGGACAGTTAGACACTGAAAGGGATGAAGTGAGGGATATAATAAAGAGACTTGATGCAGTACAACTTTCTAACATAATGTACAAGAACTCTTTAGATGGTGCTCAAATTTTAACCCGGGAAGCATTGTTAAGGGAAATGTTCTCTAATACGAAAACCACTGCTGGACGGTTGCATGTAGCCAAACAATTGTTAACTCTTCCTGTTGGAAACTTGAAGTCTTTTGCTGGAAGTAAAGAGGGGCTAGCCATTCTCAATTCATGGATACTGGACTCAATGGGAAAGGATGGGACCCAACTCTTGAGGCACTGTTTGCGACTTCTTGTCCGTGTTTCAACTGATCTTCTTGCTGTACGATTATCAGGAATGGGAAAAACAGTGAAGGAAAAAGTTTGTGTACATACTAGCCGTGATATTCGTGCTATAGCAAGCCAGTTGGTCAATGTATGGCTTGAAGTTTTTCGTAAGGAAAAAGCTTCTAATGGTGGATTGAAGTTACCAAGACAAACAACTGCAGTAGATGTATCTAAGAGAAAATCTGCAAAAGATTCAGCCTCGGGAAAACCACCTCTGGGCACATATCATGGTACCATTGAGAATAAAGGAGGCTTGCTGAATCCTACCTCAGCTGGAAGCAATTCACCTTGCCATGCCCATGTGAAGAAATTGCACAGCAAACAAGGAAGACAACCGGCAGCATATGACTCAAGGCATGAAGTCAGTTCTTCCAGGTCTAAAGGTTCAATAGAGAGAGTAGTTACGGAAAAGGAGGATAACCACTGTGCTATATCTGAAGAAGAACAGGCTGCTATAGCTGCTGCAGAGGCTGCCCGTGCTAAAGCTCTTGCTGCTGCTGAGGCATATGCCTCTGCAGAAGCCAGATGCAATTCGCTGTTCCAGCTTCCAAAGATACCATCTTTCCACAAATTTGCTAGACGTGAGCAGTCTTCACAAAATGACGAGTGTGATAGTAGAAAAAGATGGTCAGGTGGTGTTTTTGGAAGGCAGGATTGTATTTCAGAGATTGATTCTAGGAATTGCAGAGTGAGGGACTGGTCTGTTGATTTCTCCGCTGCTTGTGTCAATCTTGATAATTCCAGAATGCCGGTTGATAACCTCTCACAGAGGAGTCACTCAAATGAGATTGCCAGCCATTTGAATTTCAGAGAGCACTCTGGAGAAAGTGGTGCTGGCGACAGCAGTATATATACAAAAGCTTGGATTGACACAGCTGGTGGTGTTGCAATTAAAGATCATCATGCCATAGAGAGATGGCAATCCCAAGCAGCTGCAGCTGATTCTTATTTTTCTAACCCATCTATTCATTTGAAGGACGAGGAGGACTCAAATGCCTGTTCAAAGCTACCAAGCTGGAAGCGTGATGGTGTTGCAAATGAGAGCTCTATTTCACAGGTTACTGTAAATAAGGATGCCCTAAAGAGTCATTCCCGAGCAGCAGATCATATTAAACAGGCTGTTGTGGACTATGTTGCATCACTACTTATGCCCCTTTATAAGGCAAGAAAACTAGACAAGGATGGATACAAGGCTATAATGAAGAAAAGTGCAACAAAGGTCATGGAGCAAGCCACAGATGCAGAAAAAGCCATGACTGTTCGTGAGTTTCTAGATTTTAAGCGAAAGAATAAGATTCGCTCATTTGTGGATATATTGATTGAGAGGCACATGACAACGAAATCAGATATGAAATCTTAA 5727 0.428 MEGEDIRSGTRKKRSKKEIGFDSDDDEPIGSIFKLKRSKRKGSASGDAVREKEDFGGMDDNDTLASFRKRLKGPKRDQGSGVARGATPALLVSDEDLVGLGAKGKDEKGLALVPGGEDMQMQDSSDQHMEDSLSTIFHKAQSSSARKSRGGSRQKRGIQKVDSGLSPAGFVEAVDSVDLVVESRSGSASGSKLVGGNAMSDDALPQASEPVVTSVVEDHKCVNDCFQEEIPKGECDLDIPDGPNQSNDVCREDGKQFSSAVQVQDISCDSDQKVALQESVISDGLHKLSSVLHDEIVDSASLSKVVEGERQFTEFGEFENRLTDELVQECNSASEHDASTSIGKENVLTSWHTEPLIKSTESILKESNDMVSGKGFQESNGALELSGCLMEVDGGGKPESEFVCDRNFCDYSNLDTKVEVQDFVIGFSPKRNDVTVSGSSMVSNEAELAACSNHLEKPVEACNIPQNPTASILKCSSVLDPIQSDGSSLQSSIPDENGNSAEYHASVSDFVDNDGKISSIQRVVRKTKMRKHGDMTYEGDADWEVLINDQALNESQVMTDVDRTLRTRMKHDSSLNTGDDSENVAVVAVSAGLKARKAGPIEKIKFKEILKRKGGLKEYLDCRNQILCLWSRDVTRILPLTECGVSDTDSENGSPRSSLIREVYGFLDQYGYINVGIASQKENVGSSARHCYKLVKEKGFEESLAASMADSEDGVSFLVGQTKMSDTSNEINNGLTKDCNDLTTEPTEGTGHSNEVKVDLSNISQQAEGKNLDYQENDGLQDGTIHVSIDSSVPSSNFADCRLTSLVAKEKSSDSTCIKSVWGGQVGDILQSDLDPRKRVIVIGAGPAGLTAARHLQRQGFPVTVLEARSRIGGRVFTDHSSLSVPVDLGASIITGVEADVATERRPDPSSLICAQLGLELTVLNSDCPLYDIVTEQKVPADMDEALEAEYNSLIDDMVLVVAQKGEQAMRMSLEDGLEYALKIRRMARSESSDETEQNKSADIPFDSKNDSTVEKKLDEEILSPQERRVMDWHFAHLEYGCAASLNDVSLPYWNQDDVYGGFGGAHCMIKGGYSSVVESLGEGISIHLNHVVTNVSYGIKEPGQSYKVKVSTSNGNEFFGDAVLVTVPLGCLKAETIQFSPPLPPWKCSSVQRLGYGVLNKVALEFPSVFWDDAVDYFGATAEERNSRGHCFMFWNVRKTVGAPVLIALVVGKAAIDGQSLSSSDHVKHALKVLRKLFGQDSVPDPVASVVTDWGRDPFSYGAYSYVAVGASGEDYDILGRPVDNCLFFAGEATCKEHPDTVGGAMMSGLRESVRIIDILRSGNDYIAEVEALEAARGQLDTERDEVRDIIKRLDAVQLSNIMYKNSLDGAQILTREALLREMFSNTKTTAGRLHVAKQLLTLPVGNLKSFAGSKEGLAILNSWILDSMGKDGTQLLRHCLRLLVRVSTDLLAVRLSGMGKTVKEKVCVHTSRDIRAIASQLVNVWLEVFRKEKASNGGLKLPRQTTAVDVSKRKSAKDSASGKPPLGTYHGTIENKGGLLNPTSAGSNSPCHAHVKKLHSKQGRQPAAYDSRHEVSSSRSKGSIERVVTEKEDNHCAISEEEQAAIAAAEAARAKALAAAEAYASAEARCNSLFQLPKIPSFHKFARREQSSQNDECDSRKRWSGGVFGRQDCISEIDSRNCRVRDWSVDFSAACVNLDNSRMPVDNLSQRSHSNEIASHLNFREHSGESGAGDSSIYTKAWIDTAGGVAIKDHHAIERWQSQAAAADSYFSNPSIHLKDEEDSNACSKLPSWKRDGVANESSISQVTVNKDALKSHSRAADHIKQAVVDYVASLLMPLYKARKLDKDGYKAIMKKSATKVMEQATDAEKAMTVREFLDFKRKNKIRSFVDILIERHMTTKSDMKS* 1909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01001 1908 PRINTS Adrenodoxin reductase family signature 839 861 - -
Lapu8g01001 1908 PRINTS Adrenodoxin reductase family signature 862 875 - -
Lapu8g01001 1908 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1416 1499 IPR035441 -
Lapu8g01001 1908 SUPERFAMILY FAD-linked reductases, C-terminal domain 1156 1267 - -
Lapu8g01001 1908 MobiDBLite consensus disorder prediction 107 159 - -
Lapu8g01001 1908 Gene3D - 840 1316 IPR036188 -
Lapu8g01001 1908 MobiDBLite consensus disorder prediction 989 1010 - -
Lapu8g01001 1908 MobiDBLite consensus disorder prediction 1506 1532 - -
Lapu8g01001 1908 MobiDBLite consensus disorder prediction 120 148 - -
Lapu8g01001 1908 SUPERFAMILY FAD/NAD(P)-binding domain 836 1321 IPR036188 -
Lapu8g01001 1908 SUPERFAMILY Homeodomain-like 582 679 IPR009057 -
Lapu8g01001 1908 Gene3D - 946 1273 - -
Lapu8g01001 1908 Coils Coil 1334 1354 - -
Lapu8g01001 1908 ProSiteProfiles SWIRM domain profile. 584 684 IPR007526 GO:0005515
Lapu8g01001 1908 PANTHER FLAVIN MONOAMINE OXIDASE 838 1325 - -
Lapu8g01001 1908 MobiDBLite consensus disorder prediction 1561 1585 - -
Lapu8g01001 1908 MobiDBLite consensus disorder prediction 1 77 - -
Lapu8g01001 1908 MobiDBLite consensus disorder prediction 1 87 - -
Lapu8g01001 1908 Pfam Flavin containing amine oxidoreductase 848 1318 IPR002937 GO:0016491
Lapu8g01001 1908 Gene3D - 583 687 IPR036388 -
Lapu8g01001 1908 Pfam SWIRM domain 597 674 IPR007526 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01001 Lapu-Chr8 28096504 28110295 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI or SNF-SWI3 Lapu8g01001 Amino_oxidase 1.6e-104 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g01001 8 28096504 28110295 Lapu8g01001 8 28096504 28110295 ECH