Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01000 ATGAACGCAATTCGTTCTCGTTTGTTTATGAGAATGGCAGAAGACATAGGAAAGAGCAGCCTCGAATCCTCTGCTGTCGCTGCTTCTGCTTCGACAACAACCTCGCGAGGCTTATGGCCTTCCGTCTTACGTTGGATACCTACCTCCACCGACCACATCATCAACGCCGAGAAGCGCCTTCTCTCTCTTGTCAAGACTCCGTATGTTCAAGAACAGATTAATATAGGTTCTGGTCCACCTGATTCCAGAGTTAGATGGTTCCGTTCATCGAGCAATGAACCACGGTTTATTAACACTGTCACATTTGACAGTAAGGATGATTCTCCTACGTTGGTAATGGTTCATGGATATGCGGCGTCACAGGGTTTCTTTTTTCGCAATTTTGATGCACTTGCCACTCGTTTCAGAGTTATTGCTATTGATCAACTTGGTTGGGGTGGATCTAGCAGGCCTGACTTTTCATGCAGAAGCACTGAAGAAACTGAGGCGTGGTTTATTGATTCTTTTGAGGAATGGAGAAAGGCGAAAAACCTGAACAATTTTATACTACTAGGGCATTCTTTTGGTGGTTATGTTGCTTCGAAATACGCCCTTAAGCACCCCGAACATGTAAAACATTTGATTCTAGTTGGACCTGCTGGATTTTCGTCGGAATCAGAGAGAATTACAAAGTTCTTATCTACGTGGAAGGGATCAATCCTGAATCAAATATGGGAATCTAATTTTACGCCTCAGAAAATCATCAGGGGTTTAGGTCCTTGGGGTCCTGATATGGTCCGCAAGTATACCAGTGCCAGGTTTGTTACACATACAACTGGGGAAATGCTGACGGAATCTGAATCAAGATTACTGACAGATTATGTTTACCATACTTTAGCAGCCAAAGCTAGTGGGGAGCTGTGCTTAAAATATATATTTTCATTTGGAGCACTGCCGAGGTCGCCTCTTCTTGACAGGGCATCAGAGTGGAAGGTACCCACCACTTTCATATATGGTTTTCAGGACTGGATGAATTATGAAGGGGCTCAAGAAGCTCGCAAACATATGAAGGTTCCATGTGAAATCCTTAGGGTTCCTCAGGCCGGGCACTATGTGTTCATTGACAACCCAAGTGGCTTCCATTCAGCTGTGTTTTACGCTTGCCGAAGGTTTCTAAGTTCTGATCCAGACAGTGAATCCCTTCCTGAATGGCTAACCACAGCATAG 1206 0.4444 MNAIRSRLFMRMAEDIGKSSLESSAVAASASTTTSRGLWPSVLRWIPTSTDHIINAEKRLLSLVKTPYVQEQINIGSGPPDSRVRWFRSSSNEPRFINTVTFDSKDDSPTLVMVHGYAASQGFFFRNFDALATRFRVIAIDQLGWGGSSRPDFSCRSTEETEAWFIDSFEEWRKAKNLNNFILLGHSFGGYVASKYALKHPEHVKHLILVGPAGFSSESERITKFLSTWKGSILNQIWESNFTPQKIIRGLGPWGPDMVRKYTSARFVTHTTGEMLTESESRLLTDYVYHTLAAKASGELCLKYIFSFGALPRSPLLDRASEWKVPTTFIYGFQDWMNYEGAQEARKHMKVPCEILRVPQAGHYVFIDNPSGFHSAVFYACRRFLSSDPDSESLPEWLTTA* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01000 401 PRINTS Alpha/beta hydrolase fold signature 134 149 IPR000073 -
Lapu8g01000 401 PRINTS Alpha/beta hydrolase fold signature 197 210 IPR000073 -
Lapu8g01000 401 PRINTS Alpha/beta hydrolase fold signature 183 196 IPR000073 -
Lapu8g01000 401 PRINTS Epoxide hydrolase signature 197 210 IPR000639 GO:0003824
Lapu8g01000 401 PRINTS Epoxide hydrolase signature 183 196 IPR000639 GO:0003824
Lapu8g01000 401 PRINTS Epoxide hydrolase signature 325 341 IPR000639 GO:0003824
Lapu8g01000 401 PRINTS Epoxide hydrolase signature 134 149 IPR000639 GO:0003824
Lapu8g01000 401 PRINTS Epoxide hydrolase signature 358 380 IPR000639 GO:0003824
Lapu8g01000 401 Gene3D alpha/beta hydrolase 95 383 IPR029058 -
Lapu8g01000 401 SUPERFAMILY alpha/beta-Hydrolases 98 377 IPR029058 -
Lapu8g01000 401 FunFam Probable 1-acylglycerol-3-phosphate O-acyltransferase 95 381 - -
Lapu8g01000 401 Pfam alpha/beta hydrolase fold 109 370 IPR000073 -
Lapu8g01000 401 PANTHER RE40534P-RELATED 35 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01000 Lapu-Chr8 28090248 28094747 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g01000 8 28090248 28094747 Lapu8g01000 8 28090248 28094747 ECH
Lapu8g01000 8 28090248 28094747 Lapu9g02274 9 37314009 37319996 PCT