Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00995 ATGGCTCGCTACTCCCTCTGCGCTCTCCTCATCTTCGCCGCCGTGGCCGCTGCCGCCGGGGCCAACAACGACGCCGACGACATCCTGATCCGTCAGGTGGTGCCGGAGGGCGAGGTGGAGGACCACCTGCTGAACGCCGAGCATCACTTCTCGACTTTCAAGGCGAAGTTCGGGAAAACCTACGCGACGAAGGAGGAGCACGATCATCGCTTCGGTGTGTTCAAGTCAAACCTGCGTAGGGCGAGGCTCCACGCGCAACTCGACCCCTCCGCTGTCCACGGCGTCACCAAATTCTCCGATCTCACTCCGGCGGAGTTCCATCGCCAGTTCCTCGGTCTCAAACCGCTCCGCTTGCCGGCTCACGCCGAGAAGGCCCCTATCCTCCCCACCAACAATCTCCCCAAAAATTTCGATTGGAGAGATAAAGGAGCCGTCACTAACGTCAAGGACCAGGGTTCGTGTGGTTCGTGTTGGTCTTTCAGTACTACGGGGGCGTTGGAAGGAGCCCACTTTCTGGCTACTGGTGAGCTCGTGAGCCTTAGTGAGCAACAGCTTGTGGATTGCGACCACGTGTGTGACCCAGAAGAATATGGAGCGTGTGACTCAGGCTGTAATGGTGGTTTGATGAACAACGCGTTTGAGTACTTACTTGGGTCTGGGGGAGTACAGAGAGAAAAGGACTATCCATACACTGGAAGAGATGGCACCTGCAAATTTGACAAAAGCAAAATTGCAGCTGCTGTATCTAATTACAGTGTGGTTTCCCTTGACGAAGAACAAATTGCTGCAAATCTTGTGAAGAATGGCCCTCTTGCAGGTACCTTAGTTCTTCTCTTTTATATGCAGACATACGTTGGTGGTGTCTCTTGTCCATACATCTGTGGGAAGCATTTGGATCATGGGGTTCTTTTAGTGGGTTATGGTGAAGGTGCATATGCTCCCATTCGTTTTAAGGAAAAGCCTTACTGGATCATTAAGAATTCGTGGGGGGAGAACTGGGGAGAGAATGGATACTACAAGATCTGCAAAGGTCGGAATGTATGTGGAGTGGATTCCATGGTCTCAACTGTAGGTGCTATACATACATCCAGCCAATAA 1098 0.5228 MARYSLCALLIFAAVAAAAGANNDADDILIRQVVPEGEVEDHLLNAEHHFSTFKAKFGKTYATKEEHDHRFGVFKSNLRRARLHAQLDPSAVHGVTKFSDLTPAEFHRQFLGLKPLRLPAHAEKAPILPTNNLPKNFDWRDKGAVTNVKDQGSCGSCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHVCDPEEYGACDSGCNGGLMNNAFEYLLGSGGVQREKDYPYTGRDGTCKFDKSKIAAAVSNYSVVSLDEEQIAANLVKNGPLAGTLVLLFYMQTYVGGVSCPYICGKHLDHGVLLVGYGEGAYAPIRFKEKPYWIIKNSWGENWGENGYYKICKGRNVCGVDSMVSTVGAIHTSSQ* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00995 365 Gene3D Cysteine proteinases 18 357 - -
Lapu8g00995 365 FunFam Cysteine protease RD19A 28 358 - -
Lapu8g00995 365 CDD Peptidase_C1A 134 357 IPR039417 -
Lapu8g00995 365 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 322 341 IPR025661 -
Lapu8g00995 365 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 46 350 IPR013128 GO:0008234
Lapu8g00995 365 SMART Inhibitor_I29_2 50 106 IPR013201 -
Lapu8g00995 365 SMART pept_c1 133 358 IPR000668 GO:0006508|GO:0008234
Lapu8g00995 365 SUPERFAMILY Cysteine proteinases 47 356 IPR038765 -
Lapu8g00995 365 Pfam Cathepsin propeptide inhibitor domain (I29) 50 106 IPR013201 -
Lapu8g00995 365 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 298 308 IPR025660 -
Lapu8g00995 365 PRINTS Papain cysteine protease (C1) family signature 300 310 IPR000668 GO:0006508|GO:0008234
Lapu8g00995 365 PRINTS Papain cysteine protease (C1) family signature 151 166 IPR000668 GO:0006508|GO:0008234
Lapu8g00995 365 PRINTS Papain cysteine protease (C1) family signature 322 328 IPR000668 GO:0006508|GO:0008234
Lapu8g00995 365 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 151 162 IPR000169 -
Lapu8g00995 365 Pfam Papain family cysteine protease 133 356 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00995 Lapu-Chr8 28040498 28043305 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00995 8 28040498 28043305 Lapu9g02263 9 37205059 37207167 PCT