Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00991 ATGGTTTCTCTAATTTCACCACCTTCTTCATCTTCCAACATTCAATTGCGCGAAACTCGTTTCTTCTCTACTCTCTCGATTCCACCAAGGAGCGTCCAATTCCTCCACAACACATCAAACCACAAATGGAAAACGGTACGGTGCGGGGTTACCAGCGCCGGCGCGTCTCCTCCGGCGTCGTTGACGAAGGAGCCTCACAAATTCTTCGACCACGTAATCATCACCGTTCGCGCGGGTGACGGAGGCCACGGCGCGGTGCTGAATCACAGAGAGAAGAACGACCAGGAGCAGGGTAAAATGAAGAAGAAAGGGAAAGGCTCGTTGAAGAGGGACTTCGACGGGTCGCTCATACTCCCTACGGGAGGGCACGGAGGGGACGTGGTGATCTACGCCGATGAGACCAAAGACACGTTGCTGGAGTTTCACAACAAGAGCAGGTATCACGCCAAGCGCGGTGGCAACGTTGATGCGATGGGCGTTTTGACGTCGATGTTGCGCAATGGACTAGTGGCGCCCACGCTGCGCATTCCTGTTCCTGTAGGTACAGTTGTGAAAAGCAAACGAGGGAAGATGTTGGCTGATCTAGCACAACCCGGTGATGAAGTTCTTGTTGCTAGGGGAGGACAAGGAGGGATTAGCTTGTTGGAAATGCCACAGCGTCAAAGAAAAAAGATGATGACTCTGACAACTAATGTGATGAGAGATGACTCAGATAAGATTTTAGTTCATGGCCAACCTGGAGAGGAAGTTAAGTTGGAGTTGATCCTACGAGTTGTAGCTGACGTTGGTCTGATTGGACTTCCAAATGCTGGGAAATCAACGCTTCTGGCTGCCATTACACTTGCTAAACCTGATATTGCTGATTATCCTTTTACAACATTAATGCCAAATCTTGGACGCCTAGGTGGTGATCCCAGCTTGGGGGCAGGAATGTATTCATCCGAAGCTACATTGGCTGATTTGCCTGGTCTTATTGAAGGTGCTCACTTAGGAAAGGGTCTTGGTCGCAATTTTTTGAGGCACCTCAGAAGGACTCGGCTACTGGTCCATGTTGTTGATGCTGCAACTGAGAGTCCTATAAATGACTATAGAACAGTCAGAGAAGAGTTGCGCATGTATAATCCCGCGTACCTTGAGCGACCGTATGTTGTAGTTTTGAATAAGATTGACCTGCCAGAGGCAAAGAACAAACTTCCATCATTGATTCAAGAAATCATGAGAATTGGCACCAGTGTTGCTGTTTCCGAACCAAGATCAAGCTCTGAAGTTCCGGCTCAATTGTCTGATGAAACTGATACGAAGGAGAAAATACTTGAGGACTATCCTAGACCTCTCTCTGTTGTTGGAGTCAGTGTTCTAAAGGGTATCCAGATCAATGAGATGTTAAAGGAGATAAGGTCGGCTTTAAAGAAGTGCTCAGATTCTAGTGAAACATTGGTTTCTACTTGA 1449 0.4776 MVSLISPPSSSSNIQLRETRFFSTLSIPPRSVQFLHNTSNHKWKTVRCGVTSAGASPPASLTKEPHKFFDHVIITVRAGDGGHGAVLNHREKNDQEQGKMKKKGKGSLKRDFDGSLILPTGGHGGDVVIYADETKDTLLEFHNKSRYHAKRGGNVDAMGVLTSMLRNGLVAPTLRIPVPVGTVVKSKRGKMLADLAQPGDEVLVARGGQGGISLLEMPQRQRKKMMTLTTNVMRDDSDKILVHGQPGEEVKLELILRVVADVGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGMYSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRLLVHVVDAATESPINDYRTVREELRMYNPAYLERPYVVVLNKIDLPEAKNKLPSLIQEIMRIGTSVAVSEPRSSSEVPAQLSDETDTKEKILEDYPRPLSVVGVSVLKGIQINEMLKEIRSALKKCSDSSETLVST* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00991 482 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 62 467 IPR045086 GO:0003924|GO:0005525
Lapu8g00991 482 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 261 471 IPR027417 -
Lapu8g00991 482 MobiDBLite consensus disorder prediction 86 107 - -
Lapu8g00991 482 SUPERFAMILY Obg GTP-binding protein N-terminal domain 67 226 IPR036726 -
Lapu8g00991 482 Gene3D - 259 478 IPR027417 -
Lapu8g00991 482 ProSiteProfiles Obg domain profile. 66 259 IPR006169 -
Lapu8g00991 482 Pfam GTP1/OBG 70 257 IPR006169 -
Lapu8g00991 482 CDD Obg 260 405 IPR031167 GO:0005525
Lapu8g00991 482 PRINTS GTP1/OBG GTP-binding protein family signature 283 301 IPR006073 GO:0005525
Lapu8g00991 482 PRINTS GTP1/OBG GTP-binding protein family signature 262 282 IPR006073 GO:0005525
Lapu8g00991 482 PRINTS GTP1/OBG GTP-binding protein family signature 335 353 IPR006073 GO:0005525
Lapu8g00991 482 PRINTS GTP1/OBG GTP-binding protein family signature 318 333 IPR006073 GO:0005525
Lapu8g00991 482 Gene3D GTP1/OBG domain 67 258 IPR036726 -
Lapu8g00991 482 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 260 470 IPR031167 GO:0005525
Lapu8g00991 482 Pfam 50S ribosome-binding GTPase 261 388 IPR006073 GO:0005525
Lapu8g00991 482 ProSitePatterns GTP1/OBG family signature. 320 333 IPR006074 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00991 Lapu-Chr8 28003844 28009591 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00991 8 28003844 28009591 Lapu8g00991 8 28003844 28009591 ECH