Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00977 ATGGGATCGGCTTGTTGTGTTGCTGCAAAGAATCCTAATCTTCCTAACAGAACTGGCGGTGAAAGCTTGCGTAGAGATGTTGTGTGTTCACCATCGTGGAGCTTTCAATGGGATAGTAGGGGGCGTGTTGCTGGTGAAATTGAGAATCCTTCTTGCCACTCATCTCATGTGGACAGTAGAAATGTCAGCATGGAGTTAAAAGGTTCATTAAGTTCTGAAAGAGGTAATTTGTCTGATGGGGGAAGCATCATGGAGAATTCTATAACTCCTGTTTCTCTGAAGTCCCCTGTTGACGAGGCACTGGTTGCAAATCTGATGACCCCCTCTTCTGATCTGTCCATGTCAAGCAATTTTTCTACAGTGGTGAAGAACCCTGCGGAATCTTCAATACCAAATCTTTCTTTTTCAATACCTTCAGTCTTCTCAACACCCACAGCAGATCCTTTGCCTAATCACAATTATCACCATCTTCCCAACTCTACCCCAACAAGATGGACACATCGATCTCCAGCACACCCTCTGTTGAGACAGATTTCTGATAGTCGAATCATGGGTCTGAAATCGCCAGACAACTCAATTTCTGAAGGAAGGCCATCCTTTGTACTCTCTACTTGCAGCAATGAAATGGCTGCGGGGTCCCTATGTGGATCGTCTGATGGCTGGTCAATGCGCACCTTCTCTGAGATGGTGGCATCATCCCAAAGGGAAAGGTGGTCCTTTGATAGTGAGTGTTTTGGCTCTGGTCGTCACAAGATAAGTGGATCCAGTAGCAGGTTCTCATATTCTCCCTCCATGGAACTACAGTCTTGTGGGGCTTGCTCAAAGCTTTTGACCGAGAGATCAACATGGAGCAACCAGAAGTTTATTGCCGGCAATGACCTCTCAGTTGTTGCCGTGCTGGTCTGTGGTCATGCATATCATGCAGAATGTTTAGAGGCTATGACACCAGAGGCAGATAGGTATGATCCGGCTTGTCCAATTTGTATGGTTGGAGAGAAGCACTTTTCAAAGTTGTCTAGAAAAGTTCTTCGTGCTGAATCAGAGATAAAGGCCAAGAACCACAAAATATCCAGAAACCGTGTAGTTGATAGCTACCTTGATGGCGGTTTTGATGTTTTTGATCGGCAAAAAGATATCGATTTGGGAGGAAAAGTTTCAAAAATGGAGCCTAGCTCCAGTGCGAGGAGCTCATTTGGAAAGCCATTCTTGAGGCGGCACTTTTCACTCGGATCCAAGTGGAGCCGATCCCTTTCCGATAATGATTCTGCCAGGAAGAAAGGCTTTTGGGCAAGATATCGTAAAGATTGA 1308 0.4549 MGSACCVAAKNPNLPNRTGGESLRRDVVCSPSWSFQWDSRGRVAGEIENPSCHSSHVDSRNVSMELKGSLSSERGNLSDGGSIMENSITPVSLKSPVDEALVANLMTPSSDLSMSSNFSTVVKNPAESSIPNLSFSIPSVFSTPTADPLPNHNYHHLPNSTPTRWTHRSPAHPLLRQISDSRIMGLKSPDNSISEGRPSFVLSTCSNEMAAGSLCGSSDGWSMRTFSEMVASSQRERWSFDSECFGSGRHKISGSSSRFSYSPSMELQSCGACSKLLTERSTWSNQKFIAGNDLSVVAVLVCGHAYHAECLEAMTPEADRYDPACPICMVGEKHFSKLSRKVLRAESEIKAKNHKISRNRVVDSYLDGGFDVFDRQKDIDLGGKVSKMEPSSSARSSFGKPFLRRHFSLGSKWSRSLSDNDSARKKGFWARYRKD* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00977 435 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 256 330 IPR013083 -
Lapu8g00977 435 PANTHER EXPRESSED PROTEIN 1 333 - -
Lapu8g00977 435 SMART ring_2 270 328 IPR001841 -
Lapu8g00977 435 SUPERFAMILY RING/U-box 269 329 - -
Lapu8g00977 435 ProSiteProfiles Zinc finger RING-type profile. 270 328 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00977 Lapu-Chr8 27905832 27909921 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00977 8 27905832 27909921 Lapu8g00977 8 27905832 27909921 ECH