Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00969 ATGGATGCAACCATTGCATGCCTCATTGCAAGTGGTGATCTTGCTATCAAGAGGGTTGTGACAAGAAGCAGAAATTCTAGCTTCTGGGGTGAGAACACTAGGGGAAGTCTTAACGTAAAATTTCACTGTACTCATCCATGCAAGAGTTTTAAGGCCAGAAGTTTCAAGCCTGGCTTTGCATACGCTGTTTACACTCCAGACGTGAAAGATTCTCCGTTATTCGAGGGATCCATTATTCACAGTCCAAAAGCAAACCCTGAAAATGTAGCTGCCATCATATTGGGTGGAGGTGCTGGAACTCGACTCTTTCCTCTTACCAGCACAAGAGCCAAGCCCGCTGTCTTGGCTGCTACTCAAACTCCTGGAGAATCTGGGAGCAAATGGTTCCAAGGGACAGCTGATGCAGTGAGACGATTTATTTGGGTTTTTGAGGATGCCAAGAACAAGAATATTGAACACATAATGATAATTTCTGGTGACCATCTTTGCCGGATGGACTATATGAAGCTTGTGGAGAAACATAATGGGAACAATGCTGATATCACAGTTTCATGTGTACCTATGGATGAAAGCCGTGCATCAGACTATGGGCTAATGAAAATTGACAGAAGGGGACGGATTACAGAGTTTTTAGAAAATCTAAATGAAATAGATGTGAACGCAATGCGTGTTGATACCAGTATCCTAGGCTTAAGTGCAGAAGAAGCAGAGAAATATCCTTTCATTGCTCCCATGGGTGTTTCTGTATTCAGAACTGAGATCCTGCTGAAACTGCTAAGATGGAGCTGTCCTTCTTGTAATGACTTGGGATCTGAAATTATCCCATCTGCTTTGAGGGACCACAAAGTCCAAGCATATATGTTCAGGGACTACTGGAAAGATATTGGAACTATCAAGTCCTTCTTTGAAGCCAATCTGGAACTAACAGAACAGATTGTGGACTCAATTATTTCTCATGGTTGCTTCTTGAGTGAGTGTAGAGTTCAACATTCTGTTGTTGGTGTGCGTTCACGTTTAGAAGCTGGTTCAGAGCTTCAGGATACCATGATGATGGGTGCTGACTACTATCAAACTGATTCTGAAATTGCAACTCTGCTGGCAGAGGGAAAGGTTCCAGTTGGCGTAGGGCAGAATACCAAAATCAGGTGCCATGATGTCACTTAA 1164 0.4313 MDATIACLIASGDLAIKRVVTRSRNSSFWGENTRGSLNVKFHCTHPCKSFKARSFKPGFAYAVYTPDVKDSPLFEGSIIHSPKANPENVAAIILGGGAGTRLFPLTSTRAKPAVLAATQTPGESGSKWFQGTADAVRRFIWVFEDAKNKNIEHIMIISGDHLCRMDYMKLVEKHNGNNADITVSCVPMDESRASDYGLMKIDRRGRITEFLENLNEIDVNAMRVDTSILGLSAEEAEKYPFIAPMGVSVFRTEILLKLLRWSCPSCNDLGSEIIPSALRDHKVQAYMFRDYWKDIGTIKSFFEANLELTEQIVDSIISHGCFLSECRVQHSVVGVRSRLEAGSELQDTMMMGADYYQTDSEIATLLAEGKVPVGVGQNTKIRCHDVT* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00969 387 SUPERFAMILY Trimeric LpxA-like enzymes 314 382 IPR011004 -
Lapu8g00969 387 SUPERFAMILY Nucleotide-diphospho-sugar transferases 88 324 IPR029044 -
Lapu8g00969 387 Pfam Nucleotidyl transferase 114 310 IPR005835 GO:0009058
Lapu8g00969 387 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 123 308 IPR029044 -
Lapu8g00969 387 Gene3D Hexapeptide repeat proteins 309 385 - -
Lapu8g00969 387 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 48 114 IPR011831 GO:0005978|GO:0008878
Lapu8g00969 387 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 75 121 IPR029044 -
Lapu8g00969 387 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 128 136 IPR005836 GO:0005978|GO:0008878
Lapu8g00969 387 ProSitePatterns ADP-glucose pyrophosphorylase signature 1. 95 114 IPR005836 GO:0005978|GO:0008878
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00969 Lapu-Chr8 27834793 27838353 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00969 8 27834793 27838353 Lapu9g02236 9 36976841 36981153 PCT