Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00958 ATGAGTTGGAGAACCATAGCTTCCACTTCGAGACACACATTCAAGAGACTCAATGCAATCTTCGGATCTCATTCCACCACCTTCCCTTCTTTGCCGTATTCACGCGCATCTTCCGCCGCCTTTCTCCATGCGTTCACCACCACCACCCTTCACCCCGCCCAACCCACCGACGCCCTGATCGACCCGAAAGTCCATGCGCCACAAAATGACGCCGTGGTCGACGACGACGACACGACTAACGAGTTTCTATCGCGATTCGTGTGGATAATGCGGAAGAAGGTGAAGGAAGCGTACCCGGACTCCGACAAGGCCACCGTGGATGGCATGCTCGTGGCCATCGTGGAGAGGGTTACGTTGGAGATGGAAAAGGGTGAGGGAGTTGAAAGGGCGTCATCGGGTTCGGGCGATTTCAGCGAGGATTTGTGGGGAACGGTGTGGGAGGTGAGCAATATGGTGTTGGAGGATATGGACAAGGAGAGGAAGAAGGAGAAAATGAAGGGCTTCTTGCAGTGTGAAGAGGTTAAGGAAATGTGCAGATTCGCCGGTGAAGTTGGCATTCGCGGCGATTTGCTTAGGGAGCTTAGGTTCAAGTGGGCGCGTGAGAGGATGGAGGAGCATGAATTCTACGAGGGTTTGGAGAGAATGAGGAAAGAGGCACAGAATGAGGAGAAGGAAAGTGATGTTGGTAAGGAGGGGGAGAAGGAGAAGGTTGTTGTTGGACTTCCCAAGAGGAGAGGGAAGATAAGGTACAAGATTTATGGGCTTGATCTCTCTGATCCCAAGTGGGCACAAGTGGCTGATAGGATCCATGAGGCAGAGCAGGTGTTTTGGCCGCAGGAGCCGAAAGCAATTACGGGGAAAGCGAAAATTGTTATGTCGAAGATTCTGTCCTCAAAGGAGGATGATGATGGTTTGCAAAGCCTGTTGAATGAGTATGTGGAGCTTGTTCAACCTAGCAGGGTGGATTGGATAGATTTGCTTGACAAACTGAAAGAGCAGAATCATAGTCTGTACTTGAAGGTGGCTGAAATGATATTGACTGAAGATTCTTTCCAAACAAATGTCTCTGACTACTTTAGGCTTATTGATATATATGCTAAAGAGGACTGCTTTGATGATGTTGAGAGATTGTTGAAGACGATGAGCGAAAATGGTATACAACCAGATGCTTCAACAGCTAGTGTGTTGGTCCACATGTACTGCAAGGGAGGTAATCTTGACCGTGCAAATGAGGCATTTGAAATCTTGAGTGGCCTGGGTTTCCAACCAGACTTCCAAGTCTTCAAGTCGATGATCATGGCATTTGTGAATAATGGCCAGCCTAAGTTGGCCGAGAAATTGATGAGGGAGATGGATACGGGGAATATTAAACCCACGGAGGAAATATACATGGCATTGCTCCGTTCTTTTTCTCAACTTGGTGATACTAAAGGAGCTGACCGAATTTCACTAGCTATGCAGTTTGCAGGATTCCAGCAGAGTATGGAGGCATGCACCCTACTTATTGAGGCGAATGTACTTACTGGTGACCCTTATCAGGCAAAAAGCCATTTTGACTACATGATAAAACTTGGGCATAAGCCTGATGATCGGTGTGCCGCTAGCATGATTGCAGCTTATGAGAAGAAAAACTACTTGGACGATGCATTGAATCTTCTTTTGCAGTTAGAGAGTGATGGATTTGAGCCTGGGGTAGCCACTTATTCTGTTCTTGTGGACTGGTTGGGTAAGTTGCAGCTTGTTGATGAAGCTGAGCAGCTTTTAGGAAAAATAGCTTTGCTGGGTGAGGCTCCTCCTTTTAAGCTTCAAGTGAGTCTCTGTGATATGTATGCAAGGACTGGAAACGAGAAAAAGGCCCTTCAAATTCTAGGCGTTCTGGAAGCTAGGAAGGATGAATTAGGACATGCTGATTTTGAGAGAATTATAAGTGGCCTTATTGATGGTGGGTTTCAGCAGGATGCACAAAGAATATGTCGGATCATGGAGGCACGGGGTTTCGATGCATCAAGGGTCAAGGTTAACCTTTTGAAGCCTGTCCCCAGAGCACCAAGTATGAGATAG 2061 0.4736 MSWRTIASTSRHTFKRLNAIFGSHSTTFPSLPYSRASSAAFLHAFTTTTLHPAQPTDALIDPKVHAPQNDAVVDDDDTTNEFLSRFVWIMRKKVKEAYPDSDKATVDGMLVAIVERVTLEMEKGEGVERASSGSGDFSEDLWGTVWEVSNMVLEDMDKERKKEKMKGFLQCEEVKEMCRFAGEVGIRGDLLRELRFKWARERMEEHEFYEGLERMRKEAQNEEKESDVGKEGEKEKVVVGLPKRRGKIRYKIYGLDLSDPKWAQVADRIHEAEQVFWPQEPKAITGKAKIVMSKILSSKEDDDGLQSLLNEYVELVQPSRVDWIDLLDKLKEQNHSLYLKVAEMILTEDSFQTNVSDYFRLIDIYAKEDCFDDVERLLKTMSENGIQPDASTASVLVHMYCKGGNLDRANEAFEILSGLGFQPDFQVFKSMIMAFVNNGQPKLAEKLMREMDTGNIKPTEEIYMALLRSFSQLGDTKGADRISLAMQFAGFQQSMEACTLLIEANVLTGDPYQAKSHFDYMIKLGHKPDDRCAASMIAAYEKKNYLDDALNLLLQLESDGFEPGVATYSVLVDWLGKLQLVDEAEQLLGKIALLGEAPPFKLQVSLCDMYARTGNEKKALQILGVLEARKDELGHADFERIISGLIDGGFQQDAQRICRIMEARGFDASRVKVNLLKPVPRAPSMR* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00958 686 Gene3D Tetratricopeptide repeat domain 325 487 IPR011990 GO:0005515
Lapu8g00958 686 Pfam PPR repeat 567 591 IPR002885 -
Lapu8g00958 686 Pfam PPR repeat 535 561 IPR002885 -
Lapu8g00958 686 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 529 563 IPR002885 -
Lapu8g00958 686 Pfam Pentatricopeptide repeat domain 348 400 IPR002885 -
Lapu8g00958 686 Pfam Pentatricopeptide repeat domain 419 469 IPR002885 -
Lapu8g00958 686 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 389 423 IPR002885 -
Lapu8g00958 686 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 354 388 IPR002885 -
Lapu8g00958 686 Gene3D Tetratricopeptide repeat domain 488 682 IPR011990 GO:0005515
Lapu8g00958 686 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 424 458 IPR002885 -
Lapu8g00958 686 PANTHER OS07G0661900 PROTEIN 89 672 - -
Lapu8g00958 686 NCBIfam pentatricopeptide repeat 361 390 IPR002885 -
Lapu8g00958 686 NCBIfam pentatricopeptide repeat 428 459 IPR002885 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00958 8 27757407 27759917 Lapu8g00958 8 27757407 27759917 ECH