Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00954 ATGACCACCGGCGGCGGCGGAGGAGGAGATGGCGGCGGCGGCTCCGCAGTGGGAGTTCAGATCCAGCAGCATAGCCGAATGGCGCTCCCCGATTTCCTCCAGAGCGTGAATCTCAAGTACGTGAAATTAGGTTATCACTACTTGATCTCCAACCTCCTAACCCTATTTCTAGTTCCTTTGATCCTCGTCACTCTAATCCAGGTCTCACAAACCACCGACCTTCACCACCTCTGGCTCCACCTCCAGTACAACCTCCTCACCATCCTTACCTTCTCCGCCGTCCTCGTCTTCGGCCTCACGCTTTACGCCGTCACGCGCCCACGCGCCGTCTACCTTCTCGACTCGGCCTGCTTCCGCCCCGCCGACCACCTCAAAGTCCCCTTCCGTAGTTTCATGGACCACTCCCGCCTCACGGGAGACTTCGAGGAGTCTTCCCTGGATTTCCAGCGCAAGATCCTGGAACGCTCTGGTCTTGGGGAGGAGACCTACGTCCCCGAGGCCATGCACTCTATTCCGCCGCAGCCTTCGATGGCTGCTGCTAGAGCTGAGGCGGAACAAGTCATGTTTGGTGCCTTGGATAATCTCTTCCAAAACACCAGCCTTAAGCCTAAGGATATTGGTATTCTTATTGTGAATTGTAGCTTGTTTAACCCTACGCCCTCACTGTCCGCCATGATTGTTAATAAGTACAAATTGAGAGGGAACATTAGGAGCTTTAATTTGGGAGGGATGGGGTGCAGTGCTGGGGTTATTGCTGTTGATCTTGCAAAGGACCTTCTGCAGGTTCATAGGAACACTTATGCAGTGGTTGTTAGCACTGAGAACATTACTCAGAATTGGTACTTTGGGAACAAGAAGTCCATGCTCATTCCCAATTGCCTCTTCCGGGTCGGCTGCTCCGCGCTGCTGCTATCGAATAAGCCGGCAGATCGGAGGCGGGCCAAGTACCGGCTTGTCCATGTTGTGAGGACTCATCGCGGCGCCGATGACAAGGCGTTCCGGTGTGTTTACCAGGAGCAGGATGATGTTGGGAAGACTGGTGTTTCTTTGTCTAAGGATTTGATGGCAATTGCTGGTGGAGCATTAAAAACCAACATCACCACACTTGGTCCTTTGGTGCTGCCAATTAGTGAGCAGCTTCTGTTTTTCGTGACTTTGCTGATGAAGAAGTTGTTCAAGGCTGATGTGAAGCCTTACATACCGGATTTCAAGCTTGCTTTTGATCATTTTTGCATACATGCTGGAGGCAGAGCTGTGATTGATGAGCTGGAGAAGAACCTGCAGCTGCATCCCGAGCATGTGGAGGCTTCTAGGATGACCCTGCACCGGTTTGGGAACACTTCCTCCAGCTCCATTTGGTATGAATTGGCTTACATTGAAGCCAAAGGGAGGATGAAGAAGGGTAACAGGATTTGGCAAATTGCATTTGGAAGCGGTTTCAAATGTAACAGTGCTGTTTGGCAGGCACTGAGAAATATTAAGCCTTCTCCTAATGGACCATGGGAAGATTGCATTGATAAGTATCCTGTGGAAATTGTCACATAG 1545 0.512 MTTGGGGGGDGGGGSAVGVQIQQHSRMALPDFLQSVNLKYVKLGYHYLISNLLTLFLVPLILVTLIQVSQTTDLHHLWLHLQYNLLTILTFSAVLVFGLTLYAVTRPRAVYLLDSACFRPADHLKVPFRSFMDHSRLTGDFEESSLDFQRKILERSGLGEETYVPEAMHSIPPQPSMAAARAEAEQVMFGALDNLFQNTSLKPKDIGILIVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDLLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSALLLSNKPADRRRAKYRLVHVVRTHRGADDKAFRCVYQEQDDVGKTGVSLSKDLMAIAGGALKTNITTLGPLVLPISEQLLFFVTLLMKKLFKADVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLHPEHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMKKGNRIWQIAFGSGFKCNSAVWQALRNIKPSPNGPWEDCIDKYPVEIVT* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00954 514 PANTHER 3-KETOACYL-COA SYNTHASE 79 511 IPR012392 GO:0006633|GO:0016020|GO:0016747
Lapu8g00954 514 SUPERFAMILY Thiolase-like 96 314 IPR016039 GO:0016746
Lapu8g00954 514 SUPERFAMILY Thiolase-like 319 488 IPR016039 GO:0016746
Lapu8g00954 514 PIRSF Very_long_ch_3-ktacl-CoA_syn 31 514 IPR012392 GO:0006633|GO:0016020|GO:0016747
Lapu8g00954 514 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 407 488 IPR013747 -
Lapu8g00954 514 CDD CHS_like 92 487 - -
Lapu8g00954 514 Pfam FAE1/Type III polyketide synthase-like protein 102 391 IPR013601 GO:0006633|GO:0016020|GO:0016747
Lapu8g00954 514 FunFam 3-ketoacyl-CoA synthase 120 489 - -
Lapu8g00954 514 Gene3D - 132 489 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00954 Lapu-Chr8 27735029 27737185 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00954 8 27735029 27737185 Lapu8g00954 8 27735029 27737185 ECH