Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00951 ATGGCTATAGCTCGGTTGGTTCGGCAAGCGAAACGCCCTCATGGGTTGTGGGTGAAGATGGCTGCTGTGACCGTATTGGGTCTCTGTTTCATCTTTGTGTGGGGAGTGTTTTCTTCTTCTTCTTCCTCTGTCACTTCCCAAAGGGAGAGTTTTGAGGACATTGCAGAACCAATGTCCTCTTCTTCTCACAAACCGCAAAAGCTGAGAGATGAATCTAAAAAGGGTGGTGAGAGTGAGAAAAAGAGTAAGAGTAACGCTAACGGGTCTTCTCACTCTTCTGCCACGCGTCCTCACTCCGAACAACACAAGGGTAAGGACAACAAGAAAGAGAAGAAACACGTGCATAAGGAGGACAAGGAAAAAGGGAATCATCAAAGGATAGAGGATCCTCAACCCCAACATAGCCAGGAAGAGAAAGAGAAAGAGAATGAGGAAGAGAAAGAGGAGGTTGAGGTAGAGGGTGAAGAAGAGAAAGTGGATCATGAGAGTGAAGTGGATGTGGATGCTGATGGTGGCAGTGATTTGGCTGAATCAGTGGATAAGGATGATTCCGAGCAGGTGGAAGACGTGGAGGAGTTGAGGAAAAAAAGCAAGGGAAAGGTGAAAGGACCCTTGTTTGATCCAAATGCTAGCTATAGCTGGAAATTGTGTAGTTCTAGAAGCAAGCATAATTACATTCCCTGCATTGATATTGAAGTTGGTGGTGGAAAAGTAACAAGCTACCGGCACACAGAAAGGAGTTGTCCTAGGACACCCCTTATGTGTCTGGTTCCTCTTCCTCGTGAAGGGTATGGATCTTCACTGCCGTGGCCTGAGAGCAAATTGAAGATAGTGTCTAAGAATGTTGCACACCCGAAACTAGCTGCGTACATAAAAAGGCATAGATGGTTGATGGAGTCTGAAGAGTATCTTGTTTTTCCCCAAAACCAATCTGAGTTCAAGGGAGGGATTCATCACTATCTTGAGTCCATTGAAGAGATGGTACCAGACATTGAATGGGGTAAAAACATTCGTGTTGTCCTGGACATTGGATGTACAGATTCGAGCTTTGCAGCTGCTCTTTTTGATAAGGAGGTTTTAACGTTATCACTAGGGTTGAAGAACGACCTAGTGGACTTGGCTCAGGTGGCGCTTGAACGGGGCTTTCCAGCAGTGATTAGTCCTTTCAATAGAAGGAGGCTTCCTTTTCCAAGTCAAGTTTTTGATGCTATACATTGTGCAGGTTGCAGCATACCTTGGCATTCCAATGGTGGAAAACTTCTATTGGAGATGAATAGGATTCTAAGACCTGGTGGATACTTTATTATGTCAACTACACATGACAGTATTGAAGAAGAAGAAGCCATGACAACATTGACTGCATCTATTTGTTGGAATGTTCTGGCTCACAAAAGTGATGATGTTGGCGAAGTTGGAGTTAAAATATATCAGAAGCCTGAAGGAAATGATATATATGAACTGAGGAGGAGGAAGATTCCACCACTTTGCAAAGAAAATGAAAATCCTGACGCAGTCTGGTATGTTCCCATGAAGACTTGTTTGCACCCCATTCCATCTGGAATTGAACAACATGGGGCAGAGTGGCCTGAGGAATGGCCCAAGAGGCTTGAAACGTATCCTGATTGGGTGAACAACAAAGAGAAAGTGGTTGCAGACACCAATCACTGGAATGCTGTTGTTAATAAGTCATATATCAGTGGATTGGGCATTAACTGGACAAATATCCGGAATGTAATGGACATGAAATCCATCTACGGAGGATTGGCTGTAGCTCTCTCTCAACAAAAGGTCTGGGTGATGAATGTAGTGCCTGTTCATGCACCTGATACACTTCCCATCATTTTTGAACGTGGCCTCATTGGTATATACCATGATTGGTGTGAGTCATTTGGCACTTATCCAAGAACATATGACCTTTTGCATGCTGATCATCTGTTCTCACGCCTCAAAAACAGGTGCAAGCAACCTGTGTCCATTGTTGTTGAAATGGACCGTATAATAAGGCCAGGAGGTTGGACAATTATACGTGACAAAGTTGAAATTCTAAATCCATTGGAAGAAATATTGAAAAGTATGCAGTGGGAGATTAGGATGACTTTTGCTCAGGATAAGGAGGAAACCGGAACCTGCAAAACCCTCGCTCTCCGCCTCCACCGTCTCCTGGCATCCAACGGCGTCACATTCGACGTCGTCGATTCGCGGCACTACGAGCCCGAGGATCTCCCCAAGGAGACGCTCCTCCTCCTCGTTGCCTCCACGTGGCAGGACGGCGCTCCTCCCGCTGCCTCCCGCTTCTTCGCCACGTGGCTTGCTGAAGCCGCCGCCGATTTCCGCGCCGGCTCCCTCCTCCTCTCGAGCTGCCGTATAGCCGTATTTGGCGTTGGGAGCCGAGCCTACGGCGAATCCTTCAACGCCGTCGGGAAGGGCCTCGCGACGCACCTGAGGGCGCTAGGCGCCAAGGAGGTGGTTCCGCTTTGCGAAGGGGATGTTGACGGTGGTGACCTGGACAAGGTTTTCGATCGGTGGTGTGAGAAGGTGGTGGCGGTTTTGAAAGGCGGTGATGTTGCCGAATGCGATGATGACGGTGGTGGTGGTGCCCTGGAATGTGGTGACTATTCGAGTTCCGAAGAGGAGTCTGATGTGGAGAGTGAGATTGTTGATCTTGAGGACATTGCTGGTAAAGCTCCTTCACGGCGGAAGACTGTGGCTAATGGCGAAGAGAGTAATGGGAAATTGAATGGCAGAAAAGAAATGGTGACTCCGGTGATTCGAGCAAATTTAGAGAAGCAGGGGTATAAAATCATTGGGTCGCATAGTGGCGTCAAGATTTGTAGATGGACCAAGGCGCAGCTTCGTGGTCGAGGTGGTTGCTATAAGCACTCGTTTTATGGAATCGAGAGTCACAGATGCATGGAAACAACCCCTAGCTTGGCATGTGCAAATAAATGTGTTTTCTGCTGGAGGCATCACACAAATCCAGTAGGGAAAAGTTGGCAATGGCAGATGGATGATCCGATAGAGATTGTAAATTCTGCAATAGACCTCCACACAAATATGGTTAAACAAATGAAAGGAGTTCCTGGAGTCACCTTGGAGCGATTAAATGAAGGTCTCTCACCTCGTCATTGTGCATTATCTCTTGTTGGTGAACCTATTATGTATCCAGAGATAAATGCACTTGTGGATGAGCTGCACAAAAGGAGAATTTCCACTTTTCTAGTTACAAATGCACAATTTCCAGAGAAAATTAAATCACTGAAACCTATTACACAGTTATATGTCAGTGTAGATGCTGCAACAAAGGACTCTTTGAAGGCAATTGATAGACCACTCTTTGGCGATTTCTGGGAACGATTCATTGATTCCTTGACTGCTTTAAGGGAAAAACATCAGCGAACTGTGTACCGCCTGACCCTTGTGAAAGGTTGGAATACTGAAGATGTTGATGCTTATTCTAAGCTCTTTAGTATAGGAGATCCTGACTTCGTTGAAATCAAGGGAGTTACATATTGTGGCTCGTCCACTACATCAAAACTGACAATGGAAAATGTCCCTTGGCATACTGATGTGAAAGCTTTTTCAGAGGCCCTAGCTTTGAAAAGCCAAGGAGAGTATGAAGTTGCGTGTGAGCATGCTCACTCGTGCTGTGTCCTCTTGGCAAAAACTAATAAGTTCAAAATCGATGGCCAGTGGTATACATGGATAGACTACGAAAAATTTCATGATCTGGTGGCATCTGGAAGAACTTTTGACAGCACAGATTACATGACTGCCACACCTCCCTGGGCCATCTATGGATCGGAGGAAGGTGGATTTGATCCAGGACAATTGAGATATAGGAAAGAGAGACATCACAAGTCAAGCCGCAATCAATCAGGTTAG 3882 0.4601 MAIARLVRQAKRPHGLWVKMAAVTVLGLCFIFVWGVFSSSSSSVTSQRESFEDIAEPMSSSSHKPQKLRDESKKGGESEKKSKSNANGSSHSSATRPHSEQHKGKDNKKEKKHVHKEDKEKGNHQRIEDPQPQHSQEEKEKENEEEKEEVEVEGEEEKVDHESEVDVDADGGSDLAESVDKDDSEQVEDVEELRKKSKGKVKGPLFDPNASYSWKLCSSRSKHNYIPCIDIEVGGGKVTSYRHTERSCPRTPLMCLVPLPREGYGSSLPWPESKLKIVSKNVAHPKLAAYIKRHRWLMESEEYLVFPQNQSEFKGGIHHYLESIEEMVPDIEWGKNIRVVLDIGCTDSSFAAALFDKEVLTLSLGLKNDLVDLAQVALERGFPAVISPFNRRRLPFPSQVFDAIHCAGCSIPWHSNGGKLLLEMNRILRPGGYFIMSTTHDSIEEEEAMTTLTASICWNVLAHKSDDVGEVGVKIYQKPEGNDIYELRRRKIPPLCKENENPDAVWYVPMKTCLHPIPSGIEQHGAEWPEEWPKRLETYPDWVNNKEKVVADTNHWNAVVNKSYISGLGINWTNIRNVMDMKSIYGGLAVALSQQKVWVMNVVPVHAPDTLPIIFERGLIGIYHDWCESFGTYPRTYDLLHADHLFSRLKNRCKQPVSIVVEMDRIIRPGGWTIIRDKVEILNPLEEILKSMQWEIRMTFAQDKEETGTCKTLALRLHRLLASNGVTFDVVDSRHYEPEDLPKETLLLLVASTWQDGAPPAASRFFATWLAEAAADFRAGSLLLSSCRIAVFGVGSRAYGESFNAVGKGLATHLRALGAKEVVPLCEGDVDGGDLDKVFDRWCEKVVAVLKGGDVAECDDDGGGGALECGDYSSSEEESDVESEIVDLEDIAGKAPSRRKTVANGEESNGKLNGRKEMVTPVIRANLEKQGYKIIGSHSGVKICRWTKAQLRGRGGCYKHSFYGIESHRCMETTPSLACANKCVFCWRHHTNPVGKSWQWQMDDPIEIVNSAIDLHTNMVKQMKGVPGVTLERLNEGLSPRHCALSLVGEPIMYPEINALVDELHKRRISTFLVTNAQFPEKIKSLKPITQLYVSVDAATKDSLKAIDRPLFGDFWERFIDSLTALREKHQRTVYRLTLVKGWNTEDVDAYSKLFSIGDPDFVEIKGVTYCGSSTTSKLTMENVPWHTDVKAFSEALALKSQGEYEVACEHAHSCCVLLAKTNKFKIDGQWYTWIDYEKFHDLVASGRTFDSTDYMTATPPWAIYGSEEGGFDPGQLRYRKERHHKSSRNQSG* 1294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00951 1293 MobiDBLite consensus disorder prediction 96 141 - -
Lapu8g00951 1293 SFLD tRNA wybutosine-synthesizing 914 1225 IPR034556 GO:0008033|GO:0051539
Lapu8g00951 1293 CDD AdoMet_MTases 340 440 - -
Lapu8g00951 1293 Coils Coil 133 158 - -
Lapu8g00951 1293 MobiDBLite consensus disorder prediction 49 196 - -
Lapu8g00951 1293 SFLD Radical SAM 914 1225 IPR007197 GO:0003824|GO:0051536
Lapu8g00951 1293 MobiDBLite consensus disorder prediction 1267 1293 - -
Lapu8g00951 1293 MobiDBLite consensus disorder prediction 164 180 - -
Lapu8g00951 1293 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 520 699 IPR029063 -
Lapu8g00951 1293 FunFam S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase 906 1235 - -
Lapu8g00951 1293 Pfam Flavodoxin 706 842 IPR008254 GO:0010181
Lapu8g00951 1293 SUPERFAMILY Flavoproteins 706 850 IPR029039 -
Lapu8g00951 1293 Gene3D Aldolase class I 903 1233 IPR013785 -
Lapu8g00951 1293 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE 705 1288 IPR034556 GO:0008033|GO:0051539
Lapu8g00951 1293 SUPERFAMILY Radical SAM enzymes 976 1156 - -
Lapu8g00951 1293 MobiDBLite consensus disorder prediction 142 163 - -
Lapu8g00951 1293 ProSiteProfiles Flavodoxin-like domain profile. 699 847 IPR008254 GO:0010181
Lapu8g00951 1293 Gene3D Vaccinia Virus protein VP39 311 480 IPR029063 -
Lapu8g00951 1293 ProSiteProfiles Radical SAM core domain profile. 963 1206 IPR007197 GO:0003824|GO:0051536
Lapu8g00951 1293 Gene3D - 706 856 IPR029039 -
Lapu8g00951 1293 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 311 446 IPR029063 -
Lapu8g00951 1293 Pfam Wyosine base formation 1158 1221 IPR013917 -
Lapu8g00951 1293 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 224 706 IPR004159 GO:0008168
Lapu8g00951 1293 CDD Radical_SAM 975 1151 - -
Lapu8g00951 1293 MobiDBLite consensus disorder prediction 63 81 - -
Lapu8g00951 1293 Pfam Radical SAM superfamily 974 1153 IPR007197 GO:0003824|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00951 Lapu-Chr8 27688659 27700919 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00951 8 27688659 27700919 Lapu8g00951 8 27688659 27700919 ECH