Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00946 ATGGCTGAACAACATGCCACCTCCGATACTCGCCGCCACCTCTCCGTCGCACCGCCATTGCAGATCTCCAAAGATGTCCAAGGATCTGACAATCCCATTCCACTCTCACCACAGTGGCTTCTGTCAAAGCCTGGGGAGAATAAACTTGGAACAGGATCCGTGGAGAACCACATGGTCTCAAACCCACCTTATGGCCATCGCTCAGAGACTGTTAAGACATCCGGAAATGGAGAGGATGTGCATGATGCCCATAAGAAAAAGGATGTCTTTAGGCCATCCATGTTTGACTCAGAAAGTGGACGTCGTGATCGTTGGCGGGATGAGGAGAGAGACACCAAGTCCTCCATTCGGAAGGATCGTTGGAGGGATGGGGACAAAGACCTAGGTGATTCTCGTAGAGTGGATCGATGGACCGATAATATGTCTGCAAGGAACTTTGCAGAAGCACGACGTGGTGCATCTGATAATCACAGATGGAATGATTCAGGAAACCGAGAAACTAACTTTGATCAGCGGCGTGAAAGTAAGTGGAACACCCGTTGGGGTCCTGATGACAAGGAGCCAGAAGGCATTCGTGAAAAATGGAGCGACTCTGGAAAAGATGGCGATATGCATTTGGAAAAGGGTCTGTCTAACATTTCCAGTCAGGGAAAGGATGAGAAGGATGGAGATCACTATCGCCCATGGAGACCTAACTACTCACAGAGCCGTGTAAGGGTAGATCCTTCGCATACAACCCCAAACAAACCAAACTCTACATTTTCCTATGGGCGAGGCCGTGGGGAGAATACACCCCCAGTCTCTAGTATTGGACATGGCCGGACTGGTCCTCTTGGTACCTCTTTGAGTAGCACATACCCTGGAACTGCATTGGAAAAGGTTGAAAGTGGGCATGAAGAACCTAGCCCCTTTAGATATAACAGGACAAAATTGCTTGATGTGTACAGAGTGACTGGTATGGGTACAAATAGAAAACTAGTTGATGATTTTGTGCAGGTACCTAGTCTGACTCAGGATGAACCGTTGGAGCCTCTAGCTATTCTGGCACCAAATTCTGAGGAACTGGCTGTCTTAAATGGGATTGACAAAGGGGAGATAATTAGCAGCAGTGCACCTCAGGTGCCAAAAGATGGAAGGAGTTCAACAGATTTTACTCATACAAGAAGAATGAAGCCTGGAAGTTCACCTTTCCAAGATAGAGGTGAAGATGGAGGTTCTTACAAAATGCCTGAAGAGGTTTCCAGTAATAAAGATTCATCCTTTGAGGGAAATACTTCAGTTCATCCTGGGGCTCCATGGCAAACCATGCCACCTGGTGATCATGCTACCCAGTTACACCAGCCAAAAGATCCTCAAAATCAGTGGGAAAATAATTTGGGTTATTTATCTGACTCCAAAGAAATTGGTAAGTGGCAAGCTAGTGATGATCCTGTTATTAAGAGGCAGTTGTCTGGCATTTTGGAGAGTGAACTTGAAACCAGAAGAGTTCAACAGACTGTTCCAGAGGAGCTATCCCTTTTGTATAAAGATCCTAAGGGTCTGATCCAAGGTCCATTTAAAGGAATTGATATTATTGGATGGTTTGAGGCTGGATATTTTGGTATTGATTTACCTGTTCGTCTAGAAAATTCACCAGCTGACTCACCATGGTTGTCTCTTGGTGATGCCATGCCCCATTTACGAGCAAAAGCCCGACCTCCACCTGGGTTTTCTGCACCAAAGCCGAATGACTTCACAGATATTGCTGGCCGACAAATTTCCAGTACATTTGGGAATACTCTTAGTGGATTGAATGAGGTTGACATTTTGAGAAGTGATTCTAGGCATCGTCCGAATCCTGACACTGAAGCTGAAAATAGGTTTCTGGAGTCACTCATGTCTGGTAGCAAGAACAGTCCTCCCCTTGATGGCCTGGCATTGTCAGAAGGTTTACAAGGGTTTGTTGGAAATAATCCTGGTAATATGGGTCCATCAGGAGTTGATAATGGGAATAATCTTTACTTGCTTGCCAAGAGGATGGCGCTTGAACGACAACGGTCCTTACCTAGTCCGTACCCATATTGGCCAGGGCGTGATGCAGCTCCGTTTGCTCCAAAACCGGATGTTGTCCCAGATGCCTCGTTGCATTCTAAACTATTGTCTTCAGTGAGTGATAACTCTCGGCAACCTCAATCCCAAAATTCGGAGTTAATGTCAATCATCCAAGGTTTATCCGATAGGACATCTGCAGGTCTAAATAATGGTGCTGTTGGCTGGCCTAATTATCCCTTACAAGGTGCATTAGATCCCCTACAGAATAAAATTGACTTGCTTCATGATCCAAATTTTCCTCAAATGCCATTTGGAATTCAGCAGCAAAGGCTGCCGGCACAAAACCAATTGTCTCTAAGCAATTTACTGTCTCAAGCTGCTGCTGATAACCCAACTAATGCTTTGGCGGCAGAGAAGCTACTTTCTTCAGGTTTATCACAAGATCCACAGATATTAAATATGTTGCAACAGCAATACTTGTTGCAACTGCATTCTCAAGCAGCTGCTGCTCAAGCACAGCAGATCCCCTTGATTGATAAACTCCTGTTGCTGAAGCAGCAACAGAAGCAGGAGGAGCAGCAGCAGTTACTGCGACAACAGCAACAACTGCTTTCTCAAGTGTTGCAAGACCAACAGTCGAGCCAGCTTTTCAGCAATTTATCTTATGGACAATTGCAAGGTGTATTACCGATAGGGAATTTGCGTGTAGATCCTTCTCAAGTTCAACCACAAGAGATCTTTCCCATGAGCTCTCAGGCACCAATCCCCAATGTGCATAACGAGCATAATTCTAATTCTTTGAATCTACCACCTAAAGTTAGTCAAGATACAAGTTGTAATGTAAGCAGTGAAGCTTCTATACGCCTTCCACACCAATTATTTGGGGATGCTCATCATTCTGAAAATTGGGGCTCTAATCTCACTGAACAAATTAATGATCAGTATCAGAAGGAAACGCTCCCGGTATCATCAACTCATATTGATAGTTCTCCATTGCTCGACAAAGAGGAACCACACATTGTGCCTCTTCCTCTCTCTGATTACACTTCTAAGTCAGTGGAACAGGTACCACCCATCAATTTTAGGGCTGATGCTGGGGTTGTGACCTCAATTTCTAAGCCTGGTGAAAATTCTGGACATCTGCAATCTTTTGCATCCAACATTGCCTTACCTACAGCTGGATCTAATGTGTCAGCACCAGTGAGTGATCCTGGTATAGAGGTGAAGACCAAATTGGATATTGTGCACCAAGAGCAACATGCTGGTATGGAGGTGAAGACCAAATTGGACAATACTGTATCTGAACCATCTCTTGGAGACATAAGAAAGACTGAAGCTCAAGAACCTAAAAAGGCTAGTGAGAAGAAATCTAAGAAGCAAAAATCAACCAAATCTCAGTCTTTCGATCAAACAAAGGCAGGGGTAAAAAATGGGACTTTGCAGCCATCAAAGCAGTCAGAAGCTGAAATGCCAAAATTAAGTGACTTTGGGGAAGCTAAGATGGTCAAATCATTAAATGAAACAAATATGCAACAAACAAGAGTTAAAGGAACTCGGACTGGGAGTGCTGTTGCAGAGGCTGGTGATCACCAACAAGCTGGTGGCTGGACTGGTATTATTACTGGAAAGATAACTGAAACAGTTGATGTGGGCGATGCCAATGCAGCTACTTTTTTGACACAGAAAACTGAGGTACCTGCTGGACGAGCCTGGAAACCTGCTCCTGGTGTCAAACCAAAATCTTTCTTAGAAATTCAACAGGAAGAACAGAGGAAGGCAGAGACAGAAATACTAGTATCTGATGTTGCTGTGTCTGTCAATTCAATAAGCCTGACAAGTCCCTGGGCTGGGGTTGTGTCCAATCCAGACTACGTGAAGGTATCTAGTGAAAGTGTCAAAGAAGGAGGCAATACTGAAAATCCTGTCAAATCTGAAACTTCTCAGAATGTCAAGAGCAAGAAAAGTCCTCTGCACGATCTACTAGCAGAAGAAGTTCTAAAGAAATCTAATGAAATTGATGCTGAGGTTCCAGATAGTATATTGCCCTCTCATAATATAGTTGTACAATCTGAATCATTGGATGATGGCCATTTTATTGAGGCAAAAGACACTAAAAGAAGCCGAAAAAAGTCGACAAAATCAAAGGGTTCTGGAACGAAAGCTTCAGTGCCCATTACATCATCTGATGTACCTATAGCTTCAAGCCCCAATGAGAAGGGGAAAAACTCCCGTTGGGCACAGCAGGAGACAGAAGAATTGCCTGTCATCCCTGCAGGACCCTCTTTGGGTGATTTTGTTCTTTGGAAAGGAGAGCGAGAACCACCAAGCCCGTCTCCTTCTCCAGCATGGTCTACTGATTCTGGTAGGGTTCCAAAACCAACTTCATTGAGGGACATTCTAAAGGAGCAGGAGAAAAAGGCCTCTTCTGCAATTCCTGTGAGCCCAATGCCTCCCCCTCCGAAATCTCAGCCTACCCAATCTTCACGGAGTAGTGCATCTTCATGGTCAGTTTCAGCCTCCTCTCCATCTAAAGCTGCTTCTCCAATTCAGATAAATACCCAAGCTTCTCAATCAAAATACAAAGGGGATGATGATTTGTTCTGGGGTCCAATGGAGCAATCTAAGCAAGATACTAAGCAGTCTGATTTCCCTCAGCTTGCGAGCCAAGGGAGCTGGGGTGCAAAAAACGTACCTTTGAAAGGTAATTCTCCCGGACTATTGACAAGACAGAAATCAGTCAGTGCCAAATCTACTGAACGGTCTCTAGCATCATCACCTGCCTCTTCTCAATCAATGCTGAAATTGAAAAAAGATGCCATGACAAGGCATTCTGAGGCCACGGACTTCAGAGATTGGTGTGAGAATGAATGTGTTAGGCTTATTGGGACAAAAGATACAAGTTTCCTTGAATTTTGCTTGAAGCAATCCAGATCGGAAGCTGAGCTGCTCCTTATAGAAAACCTTGGATCATATGATCCGGACCATGAATTTATTGATAAATTCCTGAATTACAAGGAGTTGTTACCATCCGATGTTTTGGACATAGCTTTTCAGAGTAGGAATGACAAGAAAGTTGGTGGGCATGGTGGGGCCGGGACGGCTTCAGCTAATGCAGATATACAGGATGTGGACTACACTGAAGGATCCTCTAAAGGTGGTGGAAAGAAGAAAGGTAAGAAGGGTAAAAAGGTGAGCCCTTCTGTTTTGGGATTTAACGTTGTGAGCAACCGGATCATGATGGGTGAGATCCAGTCTGTAGAAGATTAA 5298 0.4443 MAEQHATSDTRRHLSVAPPLQISKDVQGSDNPIPLSPQWLLSKPGENKLGTGSVENHMVSNPPYGHRSETVKTSGNGEDVHDAHKKKDVFRPSMFDSESGRRDRWRDEERDTKSSIRKDRWRDGDKDLGDSRRVDRWTDNMSARNFAEARRGASDNHRWNDSGNRETNFDQRRESKWNTRWGPDDKEPEGIREKWSDSGKDGDMHLEKGLSNISSQGKDEKDGDHYRPWRPNYSQSRVRVDPSHTTPNKPNSTFSYGRGRGENTPPVSSIGHGRTGPLGTSLSSTYPGTALEKVESGHEEPSPFRYNRTKLLDVYRVTGMGTNRKLVDDFVQVPSLTQDEPLEPLAILAPNSEELAVLNGIDKGEIISSSAPQVPKDGRSSTDFTHTRRMKPGSSPFQDRGEDGGSYKMPEEVSSNKDSSFEGNTSVHPGAPWQTMPPGDHATQLHQPKDPQNQWENNLGYLSDSKEIGKWQASDDPVIKRQLSGILESELETRRVQQTVPEELSLLYKDPKGLIQGPFKGIDIIGWFEAGYFGIDLPVRLENSPADSPWLSLGDAMPHLRAKARPPPGFSAPKPNDFTDIAGRQISSTFGNTLSGLNEVDILRSDSRHRPNPDTEAENRFLESLMSGSKNSPPLDGLALSEGLQGFVGNNPGNMGPSGVDNGNNLYLLAKRMALERQRSLPSPYPYWPGRDAAPFAPKPDVVPDASLHSKLLSSVSDNSRQPQSQNSELMSIIQGLSDRTSAGLNNGAVGWPNYPLQGALDPLQNKIDLLHDPNFPQMPFGIQQQRLPAQNQLSLSNLLSQAAADNPTNALAAEKLLSSGLSQDPQILNMLQQQYLLQLHSQAAAAQAQQIPLIDKLLLLKQQQKQEEQQQLLRQQQQLLSQVLQDQQSSQLFSNLSYGQLQGVLPIGNLRVDPSQVQPQEIFPMSSQAPIPNVHNEHNSNSLNLPPKVSQDTSCNVSSEASIRLPHQLFGDAHHSENWGSNLTEQINDQYQKETLPVSSTHIDSSPLLDKEEPHIVPLPLSDYTSKSVEQVPPINFRADAGVVTSISKPGENSGHLQSFASNIALPTAGSNVSAPVSDPGIEVKTKLDIVHQEQHAGMEVKTKLDNTVSEPSLGDIRKTEAQEPKKASEKKSKKQKSTKSQSFDQTKAGVKNGTLQPSKQSEAEMPKLSDFGEAKMVKSLNETNMQQTRVKGTRTGSAVAEAGDHQQAGGWTGIITGKITETVDVGDANAATFLTQKTEVPAGRAWKPAPGVKPKSFLEIQQEEQRKAETEILVSDVAVSVNSISLTSPWAGVVSNPDYVKVSSESVKEGGNTENPVKSETSQNVKSKKSPLHDLLAEEVLKKSNEIDAEVPDSILPSHNIVVQSESLDDGHFIEAKDTKRSRKKSTKSKGSGTKASVPITSSDVPIASSPNEKGKNSRWAQQETEELPVIPAGPSLGDFVLWKGEREPPSPSPSPAWSTDSGRVPKPTSLRDILKEQEKKASSAIPVSPMPPPPKSQPTQSSRSSASSWSVSASSPSKAASPIQINTQASQSKYKGDDDLFWGPMEQSKQDTKQSDFPQLASQGSWGAKNVPLKGNSPGLLTRQKSVSAKSTERSLASSPASSQSMLKLKKDAMTRHSEATDFRDWCENECVRLIGTKDTSFLEFCLKQSRSEAELLLIENLGSYDPDHEFIDKFLNYKELLPSDVLDIAFQSRNDKKVGGHGGAGTASANADIQDVDYTEGSSKGGGKKKGKKGKKVSPSVLGFNVVSNRIMMGEIQSVED* 1766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00946 1765 Gene3D - 492 569 IPR035445 -
Lapu8g00946 1765 MobiDBLite consensus disorder prediction 214 228 - -
Lapu8g00946 1765 MobiDBLite consensus disorder prediction 1580 1612 - -
Lapu8g00946 1765 MobiDBLite consensus disorder prediction 1375 1615 - -
Lapu8g00946 1765 MobiDBLite consensus disorder prediction 236 259 - -
Lapu8g00946 1765 MobiDBLite consensus disorder prediction 1307 1333 - -
Lapu8g00946 1765 MobiDBLite consensus disorder prediction 268 286 - -
Lapu8g00946 1765 MobiDBLite consensus disorder prediction 22 36 - -
Lapu8g00946 1765 MobiDBLite consensus disorder prediction 1550 1573 - -
Lapu8g00946 1765 MobiDBLite consensus disorder prediction 150 207 - -
Lapu8g00946 1765 SMART gyf_5 504 559 IPR003169 GO:0005515
Lapu8g00946 1765 MobiDBLite consensus disorder prediction 1099 1170 - -
Lapu8g00946 1765 MobiDBLite consensus disorder prediction 1183 1204 - -
Lapu8g00946 1765 Coils Coil 859 883 - -
Lapu8g00946 1765 MobiDBLite consensus disorder prediction 1721 1742 - -
Lapu8g00946 1765 CDD GYF 503 560 IPR003169 GO:0005515
Lapu8g00946 1765 Pfam GYF domain 508 551 IPR003169 GO:0005515
Lapu8g00946 1765 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1765 - -
Lapu8g00946 1765 SUPERFAMILY GYF domain 496 560 IPR035445 -
Lapu8g00946 1765 MobiDBLite consensus disorder prediction 368 453 - -
Lapu8g00946 1765 MobiDBLite consensus disorder prediction 412 431 - -
Lapu8g00946 1765 MobiDBLite consensus disorder prediction 72 139 - -
Lapu8g00946 1765 MobiDBLite consensus disorder prediction 1307 1331 - -
Lapu8g00946 1765 MobiDBLite consensus disorder prediction 1118 1142 - -
Lapu8g00946 1765 MobiDBLite consensus disorder prediction 1393 1426 - -
Lapu8g00946 1765 MobiDBLite consensus disorder prediction 1502 1537 - -
Lapu8g00946 1765 MobiDBLite consensus disorder prediction 1 286 - -
Lapu8g00946 1765 MobiDBLite consensus disorder prediction 1143 1165 - -
Lapu8g00946 1765 ProSiteProfiles GYF domain profile. 503 554 IPR003169 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00946 Lapu-Chr8 27635731 27644456 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00946 8 27635731 27644456 Lapu8g00946 8 27635731 27644456 ECH
Lapu8g00946 8 27635731 27644456 Lapu9g02214 9 36832729 36841618 PCT