Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00932 ATGGAGTTCATGGTTCGGTGCTGTAGTTCGGGTGCGCTATTCGGATTTCGTTGCAACCTTCGATTCGCCGTTGTTGTTTTCGAGATTGTATTAATATTGGCATGGTTAGAAGTTTATAATGCAAAGCTCGCAGAACACGAATTTCATTGGGGAGATTTGGAAGGGAGGAGTGAGAACATTGCCTCACACTCTTGCATACATGACCAGATACTTGAACAGAGAAAGCGACCTGGTCGCAAGGTGTATTCAGTTACCCCACAGGTTTACAAGCCTGGTCTTTCGAAACACCTCCAGCTTAAAGGTAGAGCGTTACTCAGTGTATCAACATCATCGGAGTTTCTAGGGATTGAAAAGCAACCTATTAGGATATATCTAAATTATGATGCGGTTGGTCACTCCCCTGACAGGGATTGCCAAAAGATTGGTGATATTGTCAAGCTTGGGGAGCCTCCCGTCACTTCTCTTCCTGGTTTGCCTTCTTGTAATCCTCTTGCTGATCCTCCAGTCTTTGGTGATTGTTGGTATAACTGCACTTCTGAAGATATCTCAGGAGAGGATAAAAAACATCGCCTTAGGAAGGCATTAGGTCAGACAGCTGACTGGTTTAGGAGGGTATTGTCTGTTGAGCCTGTCAAGGGGAACTTGCGATTAAGTGGATACTCTGCATGTGGACAAGATGGAGGTGTTCAGCTTCCTCATGAATATGTTGAAGAGGGAGTCTCTGATGCTGACTTGGTTCTCTTGGTGACTACAAGACCTACAACTGGGAATACTCTTGCTTGGGCTGTGGCATGTGAACGGGACCAATGGGGTCGTGCTGTAGCTGGACATGTTAATGTTGCTCCTCGTCATTTGACAGCTGAGGCAGAGACTTTGCTATCAGCCACTCTGATACATGAGGTTGTTATGCATGTTCTTGGCTTTGATCCACATGCCTTTGCTCATTTTAGAGATGAAAGGAAAAGACGCCGGAACAAGGTTACTGAACAAGTTATGGATAAAAAGATTGGGCGGATGGTAACACGTGTGGTGCTTCCACGTGTTGTCATGCATTCTCGGCATCATTATGTGGCATTCTCAGGAAATTTTACTGGCTTAGAGCTGGAAGATGGTGGAGGACGTGGCACATCAGGGTCTCACTGGGAAAAGAGGCTTCTCATGAATGAGATCATGACCGGTTCTGTAGATACAAGATCTGTTGTTTCAAAAATGACACTAGCTCTATTAGAAGACAGTGGATGGTACAAAGCCAATTATAGCATGGCAGACCAACTTGATTGGGGTCGGAACCAGGGTACTGAGTTTGTTACCTCCCCTTGCAATCTATGGAAGGGGGCCTATCGTTGCAACACAACACAATTCTCCGGTTGTACATATAACAGAGAGGCAGAGGGTTACTGTCCAATTCTAACCTATAGTGGAGATCTTCCTCAGTGGGCTCAGTATTTTCCTCAAGCTAATAAAGGTGGGCAATCCTCATTGGCTGATTATTGCACTTATTTTGTTGCATACTCGGATGGATCATGTACAGACACTAGCAGTGCACGGGCACCTGATAGCATGCTAGGTGAAGTTCGAGGAAGCAACTCTAGGTGTATGGCCTCATCGTTAGTGCGCACAGGATTTGTACGGGGTTCTCTGACCCAGGGAAATGGTTGTTATCAGCACAGGTGCATCAACAATTCTTTAGAGGTTGCTGTAGATGGGGTGTGGAAAGTGTGTCCTCAGGCTGGTGGACCCATTCAGTTCCCTGGCTTTAATGGTGAATTAATCTGCCCGGCATATCATGAGCTCTGTAACACGGATCCAGTGGTTGTGTCTGGGCAATGTCCCAGTGCATGTAATTTCAATGGAGATTGTGTTGATGGAAGGTGTCACTGTTTTCTTGGATTTCATGGTCATGATTGCAGTAGACGTTCCTGTCCCAACAATTGCACTGGGAAGGGCATGTGTCTCTCCAGTGGTATATGTGAATGCAAAAATGGCTATACTGGCATTGACTGTTCCACTGCTGTTTGTGATGAGCAGTGCAGTCTCCATGGTGGGGTTTGTGATGATGGAGTCTGTGAATTCCGTTGTTCTGACTATGCGGGATATACTTGCCAGAACAGCTCCATGCTCCTCTCCAGTCTTTCAATTTGCAGAAACGTGCTGGGAAATGATATTTCCGGACAACATTGTGCACCCAGTGAACCTAGCATACTACAGCAGCTAGAAGAAGTGGTTGTCATGCCCAACTACCATCGATTATTCCCTGGTGGTGCTAGGAAACTATTTAATATATTTGGCAGCACGTACTGTGATGAGGCAGCTAAAAGGCTTGCCTGCTGGATCTCTATTCAGAAGTGTGAGATGGATGGAGACAACAGGCTACGAGTATGTCATTCTGCATGTCAGGCTTATAATCTAGCATGTGGAGCTTCACTGGACTGCGGTGACCAAACCCTTTTCAGCAGCGAGGGGGAGGGGGAGGGTCAGTGCACTGGCTCTGGTGAGATGAAATTGTCATGGTTTAATCGACTGAGAAATAGTTTTTCTATGAGAAATAGTTCCTCGAAAGCAATATCTTTAAGATATAGGCAGCTTTAG 2589 0.4585 MEFMVRCCSSGALFGFRCNLRFAVVVFEIVLILAWLEVYNAKLAEHEFHWGDLEGRSENIASHSCIHDQILEQRKRPGRKVYSVTPQVYKPGLSKHLQLKGRALLSVSTSSEFLGIEKQPIRIYLNYDAVGHSPDRDCQKIGDIVKLGEPPVTSLPGLPSCNPLADPPVFGDCWYNCTSEDISGEDKKHRLRKALGQTADWFRRVLSVEPVKGNLRLSGYSACGQDGGVQLPHEYVEEGVSDADLVLLVTTRPTTGNTLAWAVACERDQWGRAVAGHVNVAPRHLTAEAETLLSATLIHEVVMHVLGFDPHAFAHFRDERKRRRNKVTEQVMDKKIGRMVTRVVLPRVVMHSRHHYVAFSGNFTGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKANYSMADQLDWGRNQGTEFVTSPCNLWKGAYRCNTTQFSGCTYNREAEGYCPILTYSGDLPQWAQYFPQANKGGQSSLADYCTYFVAYSDGSCTDTSSARAPDSMLGEVRGSNSRCMASSLVRTGFVRGSLTQGNGCYQHRCINNSLEVAVDGVWKVCPQAGGPIQFPGFNGELICPAYHELCNTDPVVVSGQCPSACNFNGDCVDGRCHCFLGFHGHDCSRRSCPNNCTGKGMCLSSGICECKNGYTGIDCSTAVCDEQCSLHGGVCDDGVCEFRCSDYAGYTCQNSSMLLSSLSICRNVLGNDISGQHCAPSEPSILQQLEEVVVMPNYHRLFPGGARKLFNIFGSTYCDEAAKRLACWISIQKCEMDGDNRLRVCHSACQAYNLACGASLDCGDQTLFSSEGEGEGQCTGSGEMKLSWFNRLRNSFSMRNSSSKAISLRYRQL* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00932 862 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 58 821 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Lapu8g00932 862 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 119 603 - -
Lapu8g00932 862 FunFam leishmanolysin-like isoform X2 504 599 - -
Lapu8g00932 862 FunFam Peptidase M8, leishmanolysin 115 305 - -
Lapu8g00932 862 Gene3D - 117 304 - -
Lapu8g00932 862 PRINTS Leishmanolysin (M8) metalloprotease family signature 403 432 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Lapu8g00932 862 PRINTS Leishmanolysin (M8) metalloprotease family signature 249 278 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Lapu8g00932 862 Gene3D Leishmanolysin domain 3 443 502 - -
Lapu8g00932 862 Gene3D - 598 640 - -
Lapu8g00932 862 Gene3D Laminin 641 671 - -
Lapu8g00932 862 Gene3D Leishmanolysin , domain 2 315 440 - -
Lapu8g00932 862 FunFam Teneurin transmembrane protein 2 609 639 - -
Lapu8g00932 862 Gene3D Leishmanolysin domain 4 504 597 - -
Lapu8g00932 862 FunFam SD03917p 598 640 - -
Lapu8g00932 862 Pfam Leishmanolysin 175 601 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Lapu8g00932 862 ProSiteProfiles EGF-like domain profile. 637 669 IPR000742 -
Lapu8g00932 862 ProSitePatterns EGF-like domain signature 2. 657 668 IPR000742 -
Lapu8g00932 862 FunFam leishmanolysin-like peptidase isoform X2 316 440 - -
Lapu8g00932 862 FunFam leishmanolysin-like peptidase isoform X2 443 502 - -
Lapu8g00932 862 ProSitePatterns EGF-like domain signature 1. 657 668 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00932 Lapu-Chr8 27520677 27530214 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00932 8 27520677 27530214 Lapu8g00932 8 27520677 27530214 ECH
Lapu8g00932 8 27520677 27530214 Lapu9g02201 9 36708275 36717035 PCT