Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00923 ATGGACACTCCCTTGCTAGAGCACAGTGAGAACTCTAACGTTGGTGAAGAGAATACAATGAAGTGTGCGGTTAAGAGTTTTGGTTTTGAGTCAAAGAAGCTGTGGAGACTAGCAGGCCCTGCTATTCTCACCTCTATATGTCAGTACTCTCTTGGTGCACTCACTCAAACTTTTGCAGGTCAACTTGGTGATCTTGCTCTTGCAGCAGTTTCTGTAGAAAACTCTGTTATTGCTGGTCTTGCCTTTGGAGTCATGTTGGGAATGGGGAGTGCTTTGGAGACTCTGTGTGGGCAAGCTTTTGGTGCAGGGCAGACAAGGATGTTAGGAGTGTACATGCAGAGATCATGGGTGATCTTGTTCATCACTGCACTTCTTATGTTACCTCTTTATGTTTGGTCACCCCCAATTTTGGTGCTGTTTGGACAAACATCTCAGATCTCAAATGCTGCAGGAGAATTTGCTCTCTGGATGATACCTCAGCTGTTTGCATATGCTATAAACTTTCCAATCCAAAAGTTCTTGCAGGCACAGGGGAAAGTTTTGGTGATGTTATGGATATCAGTATGTGTTTTGCTGCTGCACGCATTTTTTAGTTGGCTTCTGATACTGGAGCTGGGGTGGGGTCTAACTGGAGCAGCAATTACTCTTAACACATCATGGTGGTTGATTGTGATTGCACAATTATTGTACATTTTCATCACAAAGTCAGATGGAGCATGGAGTGGATTCACATGGCTAGCATTTGTGGACTTGTTTGGTTTTGTAAAGCTTTCTCTGGCTTCAGCTGTTATGTTATGCTTGGAGTTTTGGTATCTGATGATACTGGTGGTGATAACAGGGCGATTAGAAAATCCTCTAATACCTGTTGATGCCATATCTATCTGTATGAACATAAATGGCTGGGATGCCATGATTGCAATTGGGTTCAATGCTGCTATAAGTGTGAGAGTATCAAATGAACTTGGTTCTGGTGATTTCAAGGCTGCAAGGCTTTCAGTGTGGGTGGTTTCCGTCACATCAGTGGCCATAGGTGTTGTGGTCATGATCATAGTGCTATCAACAAAGGATTTCTTCCCCTACTTGTTTACCACCAGCACTGCAGTTGCCAATGAAACAACTAAGCTTGCTGCTTTGCTAGGTGTCACTGTGCTTCTAAACAGCCTTCAACCAGTTCTATCTGGTGTTGCTGTTGGAGCTGGTTGGCAATCTCTAGTAGCATACATCAACATTGGGTGTTACTATGTATTTGGATTACCAGCAGGGATAATCTTGGGATTTCCACTTGATTTTGGAGTAGAGGGCATTTGGTCAGGGATGATTGCAGGCATAGTTTTGCAGACCATAATCCTTATAATAGTCACTTCAATAACCAACTGGAAAAAAGAGGCTGAAGAAGCAGAAAGTCGTGTGAGAAAGTGGGGAGGATCAATTGCAGAAGATCAGTGA 1446 0.4329 MDTPLLEHSENSNVGEENTMKCAVKSFGFESKKLWRLAGPAILTSICQYSLGALTQTFAGQLGDLALAAVSVENSVIAGLAFGVMLGMGSALETLCGQAFGAGQTRMLGVYMQRSWVILFITALLMLPLYVWSPPILVLFGQTSQISNAAGEFALWMIPQLFAYAINFPIQKFLQAQGKVLVMLWISVCVLLLHAFFSWLLILELGWGLTGAAITLNTSWWLIVIAQLLYIFITKSDGAWSGFTWLAFVDLFGFVKLSLASAVMLCLEFWYLMILVVITGRLENPLIPVDAISICMNINGWDAMIAIGFNAAISVRVSNELGSGDFKAARLSVWVVSVTSVAIGVVVMIIVLSTKDFFPYLFTTSTAVANETTKLAALLGVTVLLNSLQPVLSGVAVGAGWQSLVAYINIGCYYVFGLPAGIILGFPLDFGVEGIWSGMIAGIVLQTIILIIVTSITNWKKEAEEAESRVRKWGGSIAEDQ* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00923 481 NCBIfam MATE family efflux transporter 40 436 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lapu8g00923 481 PANTHER MULTIDRUG RESISTANCE PROTEIN 25 459 - -
Lapu8g00923 481 CDD MATE_eukaryotic 30 465 IPR045069 GO:0042910|GO:1990961
Lapu8g00923 481 Pfam MatE 261 421 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lapu8g00923 481 Pfam MatE 40 200 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00923 Lapu-Chr8 27426684 27431175 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00923 8 27426684 27431175 Lapu8g00923 8 27426684 27431175 ECH