Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00919 ATGGCGAAATCGAGCGCCGATGACGGCGAGCTCCGGCGAGCTTGCGATGCCGCAATTGAGGATCCGAAGCAGAAGATCGTGATGGCACTGCGCGTCGCCAAGAGTCACGGCATCTTAGGGAAATCGTCCAAGCTCGGTCGTCAAATGGCCAAGCCTAGGGTTCTCGCTCTCTCCATTGTTGGTGATGACGTGGTATTTGCTGCAGCGAAATCGAAGGGTCAGAGGACATCGGCTTTTCTTCGCGTATTGAAGTATTCTACGGGAGGAGTTCTCGAACCCGCAAAGCTATACAAGCTAAAGCACCTGTCAAAAGTGGAAGTTGTAGCAAATGATCCCAGTGGATGTACATTTACTCTGGGATTTGATAACCTAAGAAGCCAGAGTGTGGCTCCTCCTCAATGGACCATGCGCAATATTGATGACAGGAATCGTCTCCTTCTTTGCATCTTGAACATATGCAAAGATGTTTTGGGTCGCCTTCCAAAGGTTGTCGGTATAGATGTTGTGGAGATGGCTCTTTGGGCTAAGGAAAATACATCCCCTGTTTCTGCTCAGAATAAAGTGCGAGATGGTGGTCCTGTTGCATCTGTTGTGAGGGAGACAGAATTGAAAGTTAATGTTGAAAAAGAACTTGTCTCCCAAGCAGAGGAAGAGGACATGGAAGCTCTTTTGGGAACTTATGTCATGGGTATTGGTGAAGCAGAAGAATTTTCTGAAAGGTTGAAGAGGGAGCTCCAGGCTCTGGAAGCAGCAAATGTGCATTCTCTTTTAGAAAGTGAACCTTTGATGGATGAGGTTTTGCAAGGGCTTGAAGCAGCAACGAGTGTTGTGGAAGATATGGATGAATGGTTAAGTATGTTCAATGTAAAACTCCGGCACATGAGGGAGGATATTGCATCAATAGAAACCCGCAATAACAATCTAGAAATGCAATCAGTTAATAACAAATCTCTCATTGAAGAGCTTGACAAGCTTCTTGAGCGGTTGCGTGTCCCTTCTGAGTATGCTGCAAGTTTGACTGGAGGTTCATTTGATGAAGCTCGAATGCTTCAAAATGTTGAAGCATGTGAATGGTTGACTAGTGCCTTGCGTGGTCTTGAAGCGCCTAATCTAGACCCTAGTTATGCAAACATGAGAGCTGTTAAAGAAAAGCGTGCAGAACTTGAAAAATTAAAATCTACTTTTGTCAGGAGAGCATCTGAATTCTTGAGAAATTATTTTGCTAGTTTGGTGGACTTCATGATAAGTGATAAAAGCTACTTTTCTCAGCGAGGACAGTTAAAGAGGCCCGATCATGCTGACCTGCGGTACAAGTGCAGGACATATGCACGTCTTCTGCAACATTTGAAGAGTCTTGACAAGAATTGTTTGGGTCCACTGAGAAAAGCTTATTGCAGTTCTCTAAACTTGCTTCTTCGGAGGGAGGCCCGTGAGTTTGCAAATGAACTTCGTGCTAGTACTAAAGCATCTAGAAATCCCACTGTTTGGCTGGAAGGTTCTACAGGTTCTGGTCAGAATGTAAACGCTACTGACACTTCCACAGTCTCTGATGCTTATGCAAAGATGCTTACGATTTTTATCCCCCTTCTGGTGGATGAGAGTTCTTTTTTTGCACACTTCATGTGCTTTGAAGTTCCTACACTTGTTCCTCCTGGAGGTGTTGTTAATGGAAACAAAACTGGATATGATGATGATGATGATGATTTGGGAATTATGGACATTGATGAAACTGACGGCAAATCTGGTAAAACTTCTGCTGAGCTTGCAGCTTTGAATAAATCACTTAAGGATTTACTTGATGGAATACAAGAAGACTTTTATGCTGTTGTGGATTGGGCATACAAGATTGATCCTCTACGCTGTATATCAATGCATGGAATAACAGAACGCTATCTCTCTGGTCAGAAAGCTGATGCAGCAGGATTTGTACGTGATTTACTACGTGACCTGGAGTCTCGGATATCTTTGCAGTTCAACCGTTTTGTTGATGAAGCTTGCCATCAAATTGAAAGAAATGAACGGAATGTTCGCCAAATGGGTGTCCTCTCCTACATTCCTAGATTTGCAACCCTTGCAACTCGGATGGAGCAGTATATCCAGGGTCAGTCTAGGGATTTGGTTGACCAAGCATATACAAAATTTGTTAGCATAATGTTTGCAACTTTAGAAAAAATTGCACAAACAGATCCAAAGTATGCAGATATTTTCCTTTTTGAGAACTATGCTGCCTTTCAGAATAGTTTGTATGACCTCGCCAACATTGTACCCACTTTGGCCAAGTTTTATCATCAGGCCAGTGAAGCATATGAACAAGCCTGTACACGTCATATTAGCATGATAATCTACTATCAATTTGAACGCCTTTTCCAGTTTGCTCGAAGGATTGAGGACTTGATGTTCACTGTTGCACCTGAAGAGATTCCTTTTCAGCTTGGGCTGTCGAAAATGGATCTTCGGAAAATGTTAAAATCCAGTTTATCTGGGGTTGACAAGTCCATTGCTGCGATGTACAAGAAACTACAAAAGAATTTGACTTCAGAGGAACTACTACCCTCTTTATGGGACAAATGCAAGAAGGAGTTCCTTGATAAGTACGAAAGTTTTGCCCAACTTGTGGCCAAGATTTACCCTACGGAGACAATACCATCTGTTACAGAGATGAGAGACCTTTTGGCTTCCATGTAG 2685 0.4298 MAKSSADDGELRRACDAAIEDPKQKIVMALRVAKSHGILGKSSKLGRQMAKPRVLALSIVGDDVVFAAAKSKGQRTSAFLRVLKYSTGGVLEPAKLYKLKHLSKVEVVANDPSGCTFTLGFDNLRSQSVAPPQWTMRNIDDRNRLLLCILNICKDVLGRLPKVVGIDVVEMALWAKENTSPVSAQNKVRDGGPVASVVRETELKVNVEKELVSQAEEEDMEALLGTYVMGIGEAEEFSERLKRELQALEAANVHSLLESEPLMDEVLQGLEAATSVVEDMDEWLSMFNVKLRHMREDIASIETRNNNLEMQSVNNKSLIEELDKLLERLRVPSEYAASLTGGSFDEARMLQNVEACEWLTSALRGLEAPNLDPSYANMRAVKEKRAELEKLKSTFVRRASEFLRNYFASLVDFMISDKSYFSQRGQLKRPDHADLRYKCRTYARLLQHLKSLDKNCLGPLRKAYCSSLNLLLRREAREFANELRASTKASRNPTVWLEGSTGSGQNVNATDTSTVSDAYAKMLTIFIPLLVDESSFFAHFMCFEVPTLVPPGGVVNGNKTGYDDDDDDLGIMDIDETDGKSGKTSAELAALNKSLKDLLDGIQEDFYAVVDWAYKIDPLRCISMHGITERYLSGQKADAAGFVRDLLRDLESRISLQFNRFVDEACHQIERNERNVRQMGVLSYIPRFATLATRMEQYIQGQSRDLVDQAYTKFVSIMFATLEKIAQTDPKYADIFLFENYAAFQNSLYDLANIVPTLAKFYHQASEAYEQACTRHISMIIYYQFERLFQFARRIEDLMFTVAPEEIPFQLGLSKMDLRKMLKSSLSGVDKSIAAMYKKLQKNLTSEELLPSLWDKCKKEFLDKYESFAQLVAKIYPTETIPSVTEMRDLLASM* 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00919 894 Coils Coil 231 258 - -
Lapu8g00919 894 SMART Sec3_PIP2_bind_2 48 156 IPR028258 -
Lapu8g00919 894 Coils Coil 198 218 - -
Lapu8g00919 894 PANTHER SEC3/SYNTAXIN-RELATED 67 887 - -
Lapu8g00919 894 Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH 65 154 IPR028258 -
Lapu8g00919 894 Coils Coil 291 328 - -
Lapu8g00919 894 Pfam Exocyst complex component Sec3 589 877 IPR019160 GO:0000145|GO:0006887
Lapu8g00919 894 Pfam Exocyst complex component Sec3 234 495 IPR019160 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00919 Lapu-Chr8 27364072 27382840 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00919 8 27364072 27382840 Lapu8g00919 8 27364072 27382840 ECH
Lapu8g00919 8 27364072 27382840 Lapu9g02196 9 36660285 36678319 PCT