Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00915 ATGTCCATGTTCACTAATTCACACACGGTAATGCAAGCTTTATTGTCACCTTTGCCGGAGCCAGACCTCTCCTTGAACATAAGTCCTCCCTCTATTTCAGATATTTCTGAGGTCAAGGAAGTGGGGGCCTTTAGCAAAGTCATTTACAGCGACATGTGCTCAACTTCTGATTCGGGGAGCAGTGGAGGAAGTGATTTGAGCCATGAGTTCCACAACCTTGGTCACCACAGTGAGCCCACGTTGAAGTTAGGCTTTGGAACCGTGGATTTGAATCCTCGCCATCAGGTTCAAGGTGACACGAGAAGCTTCAGTCACCACAGCCACCACCACCACCACCTTCAACCTCACATCTATGGCCGCGATTTCAAACGAACTGCAAGAGTCGTCAATGGCGTCAAAAGAAGCGTCAGGGCTCCTAGGATGAGATGGACCACCACCCTCCATGCGCATTTTGTTCACGCGGTTCAACTTCTTGGAGGCCATGAAAGAGCAACTCCGAAGTCTGTGTTAGAGTTAATGAATGTTAAGGATCTAACCCTAGCACACGTCAAGAGTCACTTGCAGATGTATAGAACAGTGAAGAGCACTGACAAAGGCAGCACAGGTCATGGGCAGACAGATGTTGGAGTGTTGAATCCAAGGCCAGGGATTAACATTGTTCATCTGCATGCTCCCTCACCCAATTTACCAGACCCGATTCAAAGTTCCCACAGGACAGCGTGGCAATCATCAATAGAGACAAAAAGAAACAATAGTAGAGAAGAAGCCAAGATGGGTTTGACGTGTTCTGGCCTCAAGGGAAGTGAAAGCATGGTGAATGGTCACAATTATGGTGGAGGAGGCTTGGATTCTACCTCTTTGTCACCTTCCGAGGGAATGCTTGACCTTGAATTCACCCTCGGAAGACCCAATTGGCAAAAAGACCATGCAGAATCTTCAAGAGAGTTAACTCTTTTAAAGTGTTAA 966 0.4731 MSMFTNSHTVMQALLSPLPEPDLSLNISPPSISDISEVKEVGAFSKVIYSDMCSTSDSGSSGGSDLSHEFHNLGHHSEPTLKLGFGTVDLNPRHQVQGDTRSFSHHSHHHHHLQPHIYGRDFKRTARVVNGVKRSVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKGSTGHGQTDVGVLNPRPGINIVHLHAPSPNLPDPIQSSHRTAWQSSIETKRNNSREEAKMGLTCSGLKGSESMVNGHNYGGGGLDSTSLSPSEGMLDLEFTLGRPNWQKDHAESSRELTLLKC* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00915 321 Pfam Myb-like DNA-binding domain 140 191 IPR001005 -
Lapu8g00915 321 SUPERFAMILY Homeodomain-like 136 193 IPR009057 -
Lapu8g00915 321 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 21 309 IPR044847 GO:0000976|GO:0006355|GO:0010158
Lapu8g00915 321 Gene3D - 138 195 - -
Lapu8g00915 321 FunFam Myb family transcription factor 137 195 - -
Lapu8g00915 321 NCBIfam myb-like DNA-binding domain, SHAQKYF class 139 192 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00915 Lapu-Chr8 27319670 27324483 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lapu8g00915 Myb_DNA-binding 1.4e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00915 8 27319670 27324483 Lapu8g00915 8 27319670 27324483 ECH
Lapu8g00915 8 27319670 27324483 Lapu9g02186 9 36581372 36585305 PCT