Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00911 ATGGCCCTCAACGACTTCTTCGCCGGCGAGATCGCGACGGAGCTACTGAAAATGCTGATCAGCATCTCCCGAAAGTCTCTCCTCTGCCGTGCGAGCGCCGACCAGCTCATCACCTACATCCACGAGCTCCTCCCCACCATCGAGGAGATCAAGTACTCCGGCGTCGAGCTTCCAGCCCTGCGGCAGTCCCAGCTCCACCGCCTCTCGGAGCTCCTCCGGTCCGGCGTCGAGCTCTCTCACAAGGTCCTGGCCTCCAGCCGCTGGAACGTCTACCGCAACCTCCACCTCGCCAAGAAGATGGACAAGCTCGAGAAGACCGTTTCAAAGTTCATCTTCGGCCCCATGCAGGCTCACATCATGGCCGACGTCCATCACACGCGCTTCGAGATGGCCGAGCGTTTCGACCGCGTTGACAACTCTGTCCGCCGCCTCGAGCAGTACTTCGGGAACGTTAAGATTGGTGTCGGCGGCGGCGGCTGGGTCGAGGAAGCTGTCAGGAGCGTGGATGAGGATGTTGTTGACAGCAGTTCCGCCGTGGGGTTGGCGTTCGGGAAGATTAAGTTAAGGGAGATGGTTGTCGGGAGGGATGATCTCTGGGTTGTCGGGATTTCTGGGATTGGCGGCTCCGGGAAGACCACTCTCGCTAGAGAGGTCTGCAAAGACGAACAAGTTAGATGTTATTTCAGGGAGAGGATTTTGTTCCTGACTGTGTCGCAGTCTCCAAACGTGGAGCAACTAAGGACTAAGATTTGGGGTTATATTATGGGGAACGAGAGATTGGATGCGAATTATGTGGTTCCACAGTCGCTGCCGCAGTTTGAGTGCAAAAGCGAAGCAGCTCGAACTCTGATTGTTTTGGATGATGTGTGGACACTCTCTGTGGTGGAGCAGCTTGTGTGTAGAATACCTGGTTGCAAGTTTCTTGTGGTTTCCAGGTCTAAATTCCAAAAGGTGTTGAGTTATGAAGTGGAATTGCTGAGAGAAGAGGATGCCCTGGCTTTGTTCTGTCACCATGCTTTTGGACAGAAATCAATCCCTTTAGCTGCTAATGAGCATTTGGTCAAGCAGGTTGTCAGTGAGTGTGGAAGGCTTCCTTTGGCTCTTAAGGTGATTGGAGCTTCTCTGCGAGATCAAACTGAGATGTTTTGGTTAAGTGTTAAAAACAGGTTATCTCAAGGCCAAAGTATTGGGGAATCCCACGAAATCAATCTGATTGAAAGAATGGGAATTAGTATCAATTACCTTCCGGAAAAGGTCAAGGAATGTTTCTTAGACCTGTGTTCATTTCCTGAGGATAAAAAAATCCCTTTGGATGTTCTCATTAATATGTGGGTGGAAATCCATGATATTCCTGAAACAGAAGCTTATGCCATTGTTGTTGAGCTCTCCAACAAAAATCTTCTCACCTTAATGAAAGAGCCTCGTGCCGGAGGCATGTATAGCAGTTGCTATGAGATCTCAGTCACTCAACATGATATACTGAGAAACCTAGCCCTTAATTTGAGCAACCGTGCTAGCATTAATGAACGCCGGCGATTAGCAGAAGTTTTGATCATTAATTTCACATCCACCGAGTACTTCTTACCTCTCTTCATCAATAGAATGCCAAATTTGAGGGCATTGATAATAATAAACTACAGTGCAACATATGCTTGCCTTCACAACATTTCAGTTTTCAAGAACTTGTCCAACTTGAGGAGCCTCTGGCTTGAAAAAGTTTCCACCCCAGAATTATCAGGCACTGTCTTGGAAAACTTGGGAAAATTATTTATTGTGCTATGCAAGATTAATAACAGTTTGGTTGAAAAAGAGGTAGACTTGGCCAAAGTATTCCCAAACCTCTTTGACCTCACTCTTGATCATTGTGATGATCTAACCCAATTGCCCTCAAGCATTTGTGGAATGAATTCACTTGAAAACTTGAGTCTCACAAACTGCCACAATTTGACTCAATTACCTCTTGAACTAGGGAAACTAAGATCTCTTGAGATCCTTCGTTTATATGCTTGCCCTGATCTGAAAACACTTCCTGATAGCATATGTGACATGATGAGATTGAAGTATATTGACATTTCTCAATGTGTCAACCTGACATGCTTCCCTGAAGAGATTGGTGGCCTAGTAAGCTTGGAGAAGATTGACATGAGGGAATGTTCCATGATCAGAAATGTACCAAAGTCTGCATTGTCATTGCAGTCTCTGAGACTTGTAATTTGTGACGAAGAGGTATCTGAGATTTGGAGAGAGGTTGAGAAGGCCAAGCCTAGTGTTCATATTCAAGCTCTACGCTGCAAGTCGAGTGCGGAGCAACTCATCACCTACGTGCGCGAGATTCTACCCACTATCGACGAAATCAAGTACTCTGGGGTGGAGCTTCCGGCGCCGAGGCAGTCGCAGCTGGACCGCCTCTCGGAGATTCTGCGCTCCGGGGTGGAGCTCTCGCACCAGGCGCTGTCCTCCAGCCGCTGGAACGTGTACCGGAACTTCCAGCTGGCGAAGAAGATGGAGAAGCTGGAGAAGCACGTGACAAGGTTCCTGCAGGTCCCCATGCAGGCGCACATACTTGCTGACGTGCATCACGCGCGGTTCGAGATGGCGGAGCGGTTCGACCGGGTGGAGGCGTCGAACCGGCGGATGGAGCGGTTTCTTGAGGAGATGAAGATCGGAGTGAACGGGGGTGGGTGGGTGGAGGAGGCTGTGAGGAGCATGCAGGAAGATGAGACGTGGGTGGAAGGGTGTAACGGGAATAACGGTTTCGGGGTTGGGTTGGAGTTCGGGAAGAACAAGGTTATGGAGATGGTTTTCTCGAGGAGTGATGCTGATTGGATTGTCGGGATTTGTGGTTATTTCAAGGACAGGATTTTGTTTTTGACCGTGTCACAGTCTCCGAATGTGGAGCAGCTGAGAGCAAGGATCTGTGGACACATCATGGGTAGCCAAGGCTTAAATGGAAATTACGTGGTTCCACAGTGCATGCCACAGTTTGAATGCAAAGGGGAAGCTCAAGTTCTTGTTGTTCTTGATGATGTGTGGTCGCTCTCCGTGCTAGAGCAGCTTGTGTGGAAAATTCCTGGCTGCAAATTCCTTGTGGTGTCTCGATTCAGATTCCCAACATTTTTTAGTACCACTTATCACGTAGAATTGCTGGGTGAAGAGGATGCCCTCTCTTTATTTTGCCACCATGCTTTTGGACAGCAGTCAATTCCTTTGGGCGCTAATGTGAGCTTGGTCAAGCAGGTTGTGGCTGAGTGTGGAAAGCTTCCACTGGCTCTAAAGGTGATTGGAGCTTCTCTGCGAGACCAGAATGAAATGTTTTGGTTGAGCGTTAAAAGCAAGCTGTCTAAAGGTCACAGTATTGGTGAATCCTATGAAATCAACCTGATTGATAGAATGGCAATCAGTACTAACTACTTGCCAGAAAAGATCAAGGAGTGCTTCTTGGACCTGTGCTCTTTTCCTGAGGATAGAAAGATCCCTCTAGAAATTCTAATCAATATGTGGGTTGAAATCCATGACATTCGTGAGGCAGAAGCATATGCCATTGTGGTTGAGCTTTCCAACAAGAACCTTCTCACCTTAGTGAAAGAGGCACGTGCCGGGGGCATGTATAGCAGTTGCTTTGAGATTTCTGTAACTCAACATGATACACTGAGAGACCTTGCTCTTATTTTGAGCAACCGTGGGAGCATTCATGAACACCGAAGATTAGTTATGGCACAACGAGAAGAAAATGGACTACTCCCCAAAGAATGGTCAAGATACCAGGACCGACCCTTTGAAGCTCAGATTGTTTCAATCAACACAGGTGAAATGACAGAAATGGACTGGTTTGAACTGGATTTTCCCAAGGCTGAAGTGTTGATTATCAATTTCACTTCCAGTGATTACTTTCTACCTCCCTTCATCAATAAGATGCCAAATTTGAGGGCATTGATAATAATAAACTACAGTACCTCATATGCCCGCCTTCACAATGTTTCAGTTCTTAGGAATTTGACCAACTTGAGGAGTCTCTGGCTTGAAAAGGTTTCCGCCCCTCAGTTGTCAGGCACTGTCTTGCAAAACTTGAGCAAACTATTTATTGTCCTCTGCCAGATTAACAACAGTTTGGATGGGAAACAGTTTCCTAACCTCTCTGAGCTCACTCTTGATCACTGTGCTGATCTAACGTACTTGCCCTCAAGCATTTGTGGAATAAAGTCACTCCGAAACATGAGTCTCACCGACTGCCACAATTTGTCTCAACTACCTGTTGAATTTGGAAAACTAAAATCTCTAGAGATCCTTCGTTTATATGCTTGTCCATATCTAGAAACACTTCCTCCTAGCATGTGTGACATGAAGAAATTGAAGTATATTGACATTTCTCAGTGTACTAATCTGACCTGCTTCCCTAAAGAGATTGGTAGATTAGTAAGTTTAGAGAAGATTGACATGAGGGAATGCCCCATGATCAGGTATTTACCAAAATCTGCAGTGTCATTACAATCTCTACAGCTTGTAATATGTGATGAGGAGGTGTATGGTACATGGAGAGATGTTGTTGAGATGACCAAGTCAAATGTCCATATTCAAGTACCAGAACAACACTTTGATCTGGACTGGCTTCAAGAATGA 4617 0.4659 MALNDFFAGEIATELLKMLISISRKSLLCRASADQLITYIHELLPTIEEIKYSGVELPALRQSQLHRLSELLRSGVELSHKVLASSRWNVYRNLHLAKKMDKLEKTVSKFIFGPMQAHIMADVHHTRFEMAERFDRVDNSVRRLEQYFGNVKIGVGGGGWVEEAVRSVDEDVVDSSSAVGLAFGKIKLREMVVGRDDLWVVGISGIGGSGKTTLAREVCKDEQVRCYFRERILFLTVSQSPNVEQLRTKIWGYIMGNERLDANYVVPQSLPQFECKSEAARTLIVLDDVWTLSVVEQLVCRIPGCKFLVVSRSKFQKVLSYEVELLREEDALALFCHHAFGQKSIPLAANEHLVKQVVSECGRLPLALKVIGASLRDQTEMFWLSVKNRLSQGQSIGESHEINLIERMGISINYLPEKVKECFLDLCSFPEDKKIPLDVLINMWVEIHDIPETEAYAIVVELSNKNLLTLMKEPRAGGMYSSCYEISVTQHDILRNLALNLSNRASINERRRLAEVLIINFTSTEYFLPLFINRMPNLRALIIINYSATYACLHNISVFKNLSNLRSLWLEKVSTPELSGTVLENLGKLFIVLCKINNSLVEKEVDLAKVFPNLFDLTLDHCDDLTQLPSSICGMNSLENLSLTNCHNLTQLPLELGKLRSLEILRLYACPDLKTLPDSICDMMRLKYIDISQCVNLTCFPEEIGGLVSLEKIDMRECSMIRNVPKSALSLQSLRLVICDEEVSEIWREVEKAKPSVHIQALRCKSSAEQLITYVREILPTIDEIKYSGVELPAPRQSQLDRLSEILRSGVELSHQALSSSRWNVYRNFQLAKKMEKLEKHVTRFLQVPMQAHILADVHHARFEMAERFDRVEASNRRMERFLEEMKIGVNGGGWVEEAVRSMQEDETWVEGCNGNNGFGVGLEFGKNKVMEMVFSRSDADWIVGICGYFKDRILFLTVSQSPNVEQLRARICGHIMGSQGLNGNYVVPQCMPQFECKGEAQVLVVLDDVWSLSVLEQLVWKIPGCKFLVVSRFRFPTFFSTTYHVELLGEEDALSLFCHHAFGQQSIPLGANVSLVKQVVAECGKLPLALKVIGASLRDQNEMFWLSVKSKLSKGHSIGESYEINLIDRMAISTNYLPEKIKECFLDLCSFPEDRKIPLEILINMWVEIHDIREAEAYAIVVELSNKNLLTLVKEARAGGMYSSCFEISVTQHDTLRDLALILSNRGSIHEHRRLVMAQREENGLLPKEWSRYQDRPFEAQIVSINTGEMTEMDWFELDFPKAEVLIINFTSSDYFLPPFINKMPNLRALIIINYSTSYARLHNVSVLRNLTNLRSLWLEKVSAPQLSGTVLQNLSKLFIVLCQINNSLDGKQFPNLSELTLDHCADLTYLPSSICGIKSLRNMSLTDCHNLSQLPVEFGKLKSLEILRLYACPYLETLPPSMCDMKKLKYIDISQCTNLTCFPKEIGRLVSLEKIDMRECPMIRYLPKSAVSLQSLQLVICDEEVYGTWRDVVEMTKSNVHIQVPEQHFDLDWLQE* 1539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00911 1538 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Lapu8g00911 1538 Gene3D - 1048 1127 IPR042197 -
Lapu8g00911 1538 Gene3D - 325 406 IPR042197 -
Lapu8g00911 1538 SUPERFAMILY L domain-like 596 1489 - -
Lapu8g00911 1538 Gene3D Ribonuclease Inhibitor 496 757 IPR032675 -
Lapu8g00911 1538 Gene3D Ribonuclease Inhibitor 1253 1521 IPR032675 -
Lapu8g00911 1538 FunFam Probable disease resistance protein At5g04720 509 680 - -
Lapu8g00911 1538 PRINTS Disease resistance protein signature 361 375 - -
Lapu8g00911 1538 PRINTS Disease resistance protein signature 200 215 - -
Lapu8g00911 1538 PRINTS Disease resistance protein signature 633 649 - -
Lapu8g00911 1538 PRINTS Disease resistance protein signature 276 290 - -
Lapu8g00911 1538 FunFam Probable disease resistance protein At5g04720 1271 1444 - -
Lapu8g00911 1538 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 135 IPR008808 -
Lapu8g00911 1538 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 760 868 IPR008808 -
Lapu8g00911 1538 Gene3D - 175 321 IPR027417 -
Lapu8g00911 1538 Gene3D - 938 1036 IPR027417 -
Lapu8g00911 1538 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 426 IPR027417 -
Lapu8g00911 1538 Gene3D - 1129 1220 IPR036388 -
Lapu8g00911 1538 Gene3D - 407 495 IPR036388 -
Lapu8g00911 1538 ProSiteProfiles RPW8 domain profile. 726 884 IPR008808 -
Lapu8g00911 1538 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 946 1149 IPR027417 -
Lapu8g00911 1538 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 759 1536 IPR039203 GO:0050832
Lapu8g00911 1538 Pfam NB-ARC domain 197 395 IPR002182 GO:0043531
Lapu8g00911 1538 Pfam NB-ARC domain 953 1128 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00911 Lapu-Chr8 27257884 27268001 Wgd