LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu8g00905	ATGAGTCCAATGTTGTCAATGAACATTCTTCTGTGGTTCATGGTTTTGTCTTGGTGGCACTTTGGCATCTCATGCGAGGCAAACAAACAAGGGGAATATCTGCACAAGTTAATTGGATCAAAGAGGGGTCAGAAAGTGATGGCAGAAGAAGCTTCAATGGAAGGTGATGAAGATTTTTGGAAGGTTGAGGAAGAAAGGGTGTTGATGGAAGGTGACAAAGTGAAGGGTTTGCCGGGAGAACCAGAAGGTGTGGATTTTGATCAATATGGTGGCTATGTAACTGTGAATGCCAAAGCAGGGAGACGATTGTTCTACTACTTTGTAGAGTCACCTCACAATGCTTCCAACAAGCCCCTTGTTCTATGGCTCAATGGAGGGCCTGGCTGCTCTTCCCTTGGATATGGAGCCATGCAAGAATTGGGACCTTTTAGAGTCAACAGTGATGAAAGAACACTTCGCAGAAATGAATATGCATGGAACAATGTGGCAAATGTTATTTTCCTAGAATCTCCAGCAGGAGTTGGATTTTCGTATTCAAACACTTCTTCTGACTACTCTAAAACTGGAGACAAGAGCACAGCCATGGACTCATACACTTTTCTTGTAAACTGGCTCCACAGATTTCCACACTACAAATCTCGAGACCTGTTCATCACTGGAGAAAGCTATGCTGGACATTATGTTCCTCAGCTAGCTCACACTATTCTCACAAAGAATAAGCTTACAAATCACACAGTCATTAACCTCAAAGGGGTTGCGATTGGGAATGGTTGGATAGATGATAATATGTGTGAAAAGGGAATGTATGATTATTTCTGGACACATGCTTTGAACTCTGATGAAACCCATGAAGGCATTCTGAGGCATTGTGACTTTGAGAATGGTAACTTAACAGATGAATGCAACAAATATCAAACAAGAGGGGATGATGAGATTGGAGTGATTGACATTTATGACATATATGCTCCCCCTTGTGATTCTGCAACAAAAGCTGCCACTCACTCTGACAGCAATTTCGACCCTTGTTCTGACGAATATACCAAATCCTACTTAAATCTCCCCCAAGTACAAGAGGCTCTTCATGCTAAAACTTCAGAATGGTTTCCTTGCAGCGGGGTGGGATGGACAGATAGCCCAACAACAGTTCTACCCACTATAAATCGGTTAATATCAAGTGGCATAAGAACATGGATATATAGTGGTGATACAGATGGGCGTGTTCCCATAACATCATCTAGGTATTCAGTAAATGCATTGAAGCTTCCAGTCGAGACAGCATGGCGTCCATGGTATTCTGGAAATGAGGTTGGAGGATACTTGATTGGGTACAAAGGGCTCACCCTCATCACTGTAAGAGGAGCTGGGCACATGGTTCCAAGTTACCAACCAAAGCGAGCGTTAACCATGATCTCATTTTTTCTTCAGGGAGAACTTCCTCCCCAATTAAACTCTTAG	1455	0.4282	MSPMLSMNILLWFMVLSWWHFGISCEANKQGEYLHKLIGSKRGQKVMAEEASMEGDEDFWKVEEERVLMEGDKVKGLPGEPEGVDFDQYGGYVTVNAKAGRRLFYYFVESPHNASNKPLVLWLNGGPGCSSLGYGAMQELGPFRVNSDERTLRRNEYAWNNVANVIFLESPAGVGFSYSNTSSDYSKTGDKSTAMDSYTFLVNWLHRFPHYKSRDLFITGESYAGHYVPQLAHTILTKNKLTNHTVINLKGVAIGNGWIDDNMCEKGMYDYFWTHALNSDETHEGILRHCDFENGNLTDECNKYQTRGDDEIGVIDIYDIYAPPCDSATKAATHSDSNFDPCSDEYTKSYLNLPQVQEALHAKTSEWFPCSGVGWTDSPTTVLPTINRLISSGIRTWIYSGDTDGRVPITSSRYSVNALKLPVETAWRPWYSGNEVGGYLIGYKGLTLITVRGAGHMVPSYQPKRALTMISFFLQGELPPQLNS*	485

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu8g00905	484	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	73	463	IPR001563	GO:0004185\|GO:0006508
	Lapu8g00905	484	ProSitePatterns	Serine carboxypeptidases, serine active site.	218	225	IPR018202	GO:0004185
	Lapu8g00905	484	SUPERFAMILY	alpha/beta-Hydrolases	74	477	IPR029058	-
	Lapu8g00905	484	Gene3D	alpha/beta hydrolase	69	327	IPR029058	-
	Lapu8g00905	484	FunFam	Carboxypeptidase	68	327	-	-
	Lapu8g00905	484	Pfam	Serine carboxypeptidase	78	475	IPR001563	GO:0004185\|GO:0006508
	Lapu8g00905	484	Gene3D	-	342	373	-	-
	Lapu8g00905	484	Gene3D	-	382	476	-	-
	Lapu8g00905	484	PRINTS	Carboxypeptidase C serine protease (S10) family signature	155	167	IPR001563	GO:0004185\|GO:0006508
	Lapu8g00905	484	PRINTS	Carboxypeptidase C serine protease (S10) family signature	168	178	IPR001563	GO:0004185\|GO:0006508
	Lapu8g00905	484	PRINTS	Carboxypeptidase C serine protease (S10) family signature	446	459	IPR001563	GO:0004185\|GO:0006508
	Lapu8g00905	484	PRINTS	Carboxypeptidase C serine protease (S10) family signature	204	229	IPR001563	GO:0004185\|GO:0006508
	Lapu8g00905	484	ProSitePatterns	Serine carboxypeptidases, histidine active site.	446	463	IPR033124	GO:0004185
	Lapu8g00905	484	FunFam	Carboxypeptidase	382	476	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu8g00905	Lapu-Chr8	27192868	27198285	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu8g00905	347	477	Calmodulin-binding Proteins	AT2G22960	29.412	4.63e-14	68.9

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lapu8g00905	8	27192868	27198285	Lapu8g00905	8	27192868	27198285	ECH