Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00898 ATGGCAGCAACTAATGAAACTCCTTACAAAAGTAATGATGATGATGGACACCTAATTACTGTGCTCAGTATTGATGGTGGTGGCATTCGGGGAATCATTCCAGGAGTTATACTGGGTTTCCTCGAATCAGAGCTTCAGAAGCTGGATGGTGATGATGTAAGGCTAGCAGACTACTTTGATGTGATTGCCGGAACAAGCACTGGAGGATTAGTCACTGCGATGCTTACTGCTCCAAATGAAAATAACAGACCCTTGTATGCAGCCAAAGATATTAAGGATTTTTACCTTGAACATACCCCAAAAATCTTCCCACAGAACAAAGGCTGGAATTTAATCTCATCCGTGATGAAGTTCAGCAGAACTCTGTTTGGACCACAGTACGATGGAAAGTATTTACACAAGCTCATTAGGGAAAAACTAGGAGACATAAAATTGCAACAAACATTGACCAATGTCGTTATCCCAGCATTTGATATCAAACACCTTCAACCAACCATCTTTTCCAGCTTCCAGTTGAAGAAGAGGCCAGATTTAAATGGGTCGTTGTCTGATATATGCATTTCAACTTCAGCAGCTCCAACCTATCTTCCAGCTCATTCCTTTGAAATCAAAACCCGCCATGGTCATTCCAAATTCGAACTTATAGATGGTGGTGTCGCAGCAAATAACCCGGCTCTGGTGGCGATGGCAGAAGTGTCGAACCAAATTTGCCATGAAGGGTCTTGTAGTGGAAGCATGAATGTAAAACCGATGCAATACAATAAGTTTTTGGTGATATCACTGGGAACAGGTTCTCAGCAACAGGAGATGAAATACAGTGCTTCTGAGGCAGCTAAATGGGGTATCTTGAGTTGGGTTTCCACCACCAGTGGTGGCACCCCTCTAATCGATGCCTTCACTCATGCTAGTTCTGACATGGTTGATTTCCACATCTCCTCCGTTTTCCAAGCGCGCCATTCTGAACACAACTATCTCCGAATCCAGGATGATACTTTAACTGGGGACTTATGTTCGGTTGACGTGGCCACGGAGAAGAATTTGAATGGTCTCGTCCAAGTTGCGGAATCATTGTTAAAGAAACCAGTTTCAAAGATTAACTTGAGGACTGGTGTTCATGAACCTGTTCATTCTCACGAAACAAACGCAGATGCCTTGAAGAGGTTTGCGGAACGACTATCCAAACAGAGGAGATATCGTAAAGCGAATAATGGGAATCTTTAA 1221 0.4308 MAATNETPYKSNDDDGHLITVLSIDGGGIRGIIPGVILGFLESELQKLDGDDVRLADYFDVIAGTSTGGLVTAMLTAPNENNRPLYAAKDIKDFYLEHTPKIFPQNKGWNLISSVMKFSRTLFGPQYDGKYLHKLIREKLGDIKLQQTLTNVVIPAFDIKHLQPTIFSSFQLKKRPDLNGSLSDICISTSAAPTYLPAHSFEIKTRHGHSKFELIDGGVAANNPALVAMAEVSNQICHEGSCSGSMNVKPMQYNKFLVISLGTGSQQQEMKYSASEAAKWGILSWVSTTSGGTPLIDAFTHASSDMVDFHISSVFQARHSEHNYLRIQDDTLTGDLCSVDVATEKNLNGLVQVAESLLKKPVSKINLRTGVHEPVHSHETNADALKRFAERLSKQRRYRKANNGNL* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00898 406 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 22 229 IPR002641 GO:0006629
Lapu8g00898 406 Pfam Patatin-like phospholipase 22 229 IPR002641 GO:0006629
Lapu8g00898 406 PANTHER XYLOSE ISOMERASE 12 401 - -
Lapu8g00898 406 FunFam Patatin 11 404 - -
Lapu8g00898 406 Gene3D Cytosolic phospholipase A2 catalytic domain 7 405 - -
Lapu8g00898 406 SUPERFAMILY FabD/lysophospholipase-like 19 384 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00898 Lapu-Chr8 27133911 27137412 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00898 16 399 Miscellaneous Gene Families AT2G26560 61.818 2.59e-169 478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00898 8 27133911 27137412 Lapu8g00898 8 27133911 27137412 ECH