Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00889 ATGGCTGCCAGGAGTGAACACCAAACGGTTCCTCTTTCGGTGCTCCTGAAGCGTGAATTGGCTCATGAGAAAATTGAGAAGCCTGAGATTGCTCATGGCCAAGCTTGCCAAAGCAAGAAAGGGGAGGATTTAACACTGATCAAGACAGAATGCCAAAGGATGGTGGGGGATGGGGTCTCTACATATTCAGTTTTTGGGTTTTCCGTGGTTCCGTTTTCTGATGTAGAGGTTTTACAGCTGTTTGATGGACACAATGGATCTGCTGCTGCTATTTATACTAAGGAGAATCTTCTAAATAATGTTTTAAGCGCAATTCCTCCAGATCTTAATAGAGATGAGTGGATAGCAGCGTTGCCCAGGGCTTTAGTTGCTGGCTTTGTAAAAACTGATAAAGATTTTCAAGAGAAAGGACAAAAATCTGGAACAACTGTCACCTTTGTGATTATAGAAGGTTGGGTTGTAACAGTTGCATCAGTTGGCGATTCCCGTTGTGTGCTTGAATCTTCTGATGGTGAGATTTATTACTTGTCTGCGGATCACAGGCTAGACACGAATGAAGAGGAGAGGGTGCGGATCACCTCTAGCGGTGGTGAAGTTGGTCGGCTAAATACAGGGGGAGGTGCAGAGGTCGGTCCTTTGAGATGCTGGCCCGGTGGCTTGTGTCTCTCACGATCTATTGGAGATATGGATGTTGGTGAATTTATTGTCCCTGTACCGCATGTAAAGCAAGTGAAGTTGTCCACTGCTGGAGGCCGGCTTGTTATCTGCAGTGATGGTGTTTGGGATTCTCTACCTGCAGAAATAGCCCTTGATTGTTGTCGTGGAATGTCACCTGATGCCGCAGCACCACATATTGTTAAAGAAGCTGTACAAGCAAAGGGACTTAGAGATGATACAACCTGCATCGTTGTTGATATATTACCTCAGGAGAAGCCATCTGTTTCTGCGTCACAAACAAAGAAGCCAGTAAAGGGAATGCTCAAGTCCATGTTTCGTAAAAAGTCTTCTGAATCATCTTCTTATAACGACAAAGAGTATGCTGAGCCAGATGTTGTAGAGGAGTTGTATGAAGAAGGATCTGCCATGCTTTCTGAGAGGTTCGATACTAAATATCCAGTCTGCAACATGTTTAAGTTGTTTATGTGTGCAGTATGTCAAGTAGAGATAAAACCTGGAGAGGGTATTTCAATACATGAGGGTGCACCCAACTCTCGAAAATTTCGTCCCTGGGACGGACCTTTCCTGTGTTCAAGTTGCCAAGAGAAGAAAGAAGCCATGGAAGGGAAACGATCATCAGATAGACATAGCAGTGGAAGTGACGAATGA 1326 0.4457 MAARSEHQTVPLSVLLKRELAHEKIEKPEIAHGQACQSKKGEDLTLIKTECQRMVGDGVSTYSVFGFSVVPFSDVEVLQLFDGHNGSAAAIYTKENLLNNVLSAIPPDLNRDEWIAALPRALVAGFVKTDKDFQEKGQKSGTTVTFVIIEGWVVTVASVGDSRCVLESSDGEIYYLSADHRLDTNEEERVRITSSGGEVGRLNTGGGAEVGPLRCWPGGLCLSRSIGDMDVGEFIVPVPHVKQVKLSTAGGRLVICSDGVWDSLPAEIALDCCRGMSPDAAAPHIVKEAVQAKGLRDDTTCIVVDILPQEKPSVSASQTKKPVKGMLKSMFRKKSSESSSYNDKEYAEPDVVEELYEEGSAMLSERFDTKYPVCNMFKLFMCAVCQVEIKPGEGISIHEGAPNSRKFRPWDGPFLCSSCQEKKEAMEGKRSSDRHSSGSDE* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00889 441 ProSiteProfiles PPM-type phosphatase domain profile. 56 306 IPR001932 -
Lapu8g00889 441 PANTHER PROTEIN PHOSPHATASE 33 305 IPR015655 GO:0004722|GO:0006470
Lapu8g00889 441 SMART PP2C_SIG_2 54 306 IPR001932 -
Lapu8g00889 441 Pfam Protein phosphatase 2C 73 290 IPR001932 -
Lapu8g00889 441 Gene3D - 39 315 IPR036457 -
Lapu8g00889 441 FunFam probable protein phosphatase 2C 12 32 312 - -
Lapu8g00889 441 SMART PP2C_4 26 304 IPR001932 -
Lapu8g00889 441 SUPERFAMILY PP2C-like 72 306 IPR036457 -
Lapu8g00889 441 CDD PP2Cc 80 306 IPR001932 -
Lapu8g00889 441 MobiDBLite consensus disorder prediction 422 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00889 Lapu-Chr8 27076027 27081614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00889 1 440 PP2C-type Phosphatase Gene Family AT1G47380 76.417 0.0 707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00889 8 27076027 27081614 Lapu8g00889 8 27076027 27081614 ECH
Lapu8g00889 8 27076027 27081614 Lapu9g02162 9 36367182 36372724 PCT