Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00856 ATGACTAACATGCCTGCAAAATTGTTGGTCACAATTTTGTGCACCCTCTTGGTGTTTCTTCCTGTGCACATGTCACCACATGATGTTAACATAGACACAAAAAAGTTCAGAAGTAGTAGCAGTGGCTACAGGAGCAAAGGTAGTGGTGGTGGCGGCTCAGCCAAAAGTTGCAACCACAACAGCAACAAATTGGACACAAACACAAGACCATGTCAAAATTCTACTACCATTCAAGCAGTTCCAGCTTCGCCTCCCCTTGTATTTGCAGACCAAAGACTTGCAGTAGTGTACCCAATAATCCAAAAATTCAAGTCTACCATCACCTTGGATCCTTTAGGAGTGACCAAAACTTGGGTAGGATCAGACATATGCAGCTACAAAGGCTTCTACTGTGACACTCCCCCTGACAACAGTTCTGCCACTGCTTTGGCCTCTATTGACTTCAATGGTTTCCAACTTGCTGCTTCTACCCTTGATGGCTTCATTGATAGCCTCCCTGATATTGCTCTCTTTCATGTAAATTCCAACAGTTTTGGTGGCACCATCTCACCCCAAATAGCCAAACTCCCTTACCTCTATGAGCTCGATGTCAGCAACAATCAATTATCTGGTCCATTTCCCACTGCTGTTCTAGGCGTGAGTACTTTAACATTCTTGGACTTAAGGTTCAATTTCTTTTCTGGGGCAGTGCCACCAGAAATATTCATACAGAACCTCCAAGTCCTTTTTATAAACAACAACATCTTCACTCAAGGGTTGCCAGATAACTTAGCCACCACTCAAATTCTCTTACTCACCTTAGCAAACAACAAGTTCATGGGTCCAATCCCGAGAAGTCTTCCAAAGGCTTTGGCCTCTCTAAGTGAAGTATTGTTACTCAACAACCAGTTAACAGGCTGTTTGCCTTATGAGATTGGTTTTCTTGAAGAGGCCACAGTGTTTGATGCTGGGAACAACCAATTGACAGGTCCTTTGCCTTTATCTTTGAGTTGTCTTGAGAAGGTGGAGGTGCTCAATTTGGGTGGTAATCTTTTGTATGGCATGGTGCCAGAAGTGGTGTGTGCAGGGTTGGTGAATTTGGTCAACTTTTCATTATCAGATAACTATTTTACTGTAGTGGGGCCACTGTGTAGGATGCTGATTCAGAGAGGGGTTCTTGATGTTAGGAACAATTGTATTCCCGATCTTCCGTTCCAGAGATCAGTGATTGAGTGTGCCGAGTTCTTTGCAACACCAAGGATGTGTCCCTTCATGTGGTTTTATAGCCTCATCCCTTGTACGCTTCCTTTTCAAAATCCCATTCCTTAG 1308 0.4365 MTNMPAKLLVTILCTLLVFLPVHMSPHDVNIDTKKFRSSSSGYRSKGSGGGGSAKSCNHNSNKLDTNTRPCQNSTTIQAVPASPPLVFADQRLAVVYPIIQKFKSTITLDPLGVTKTWVGSDICSYKGFYCDTPPDNSSATALASIDFNGFQLAASTLDGFIDSLPDIALFHVNSNSFGGTISPQIAKLPYLYELDVSNNQLSGPFPTAVLGVSTLTFLDLRFNFFSGAVPPEIFIQNLQVLFINNNIFTQGLPDNLATTQILLLTLANNKFMGPIPRSLPKALASLSEVLLLNNQLTGCLPYEIGFLEEATVFDAGNNQLTGPLPLSLSCLEKVEVLNLGGNLLYGMVPEVVCAGLVNLVNFSLSDNYFTVVGPLCRMLIQRGVLDVRNNCIPDLPFQRSVIECAEFFATPRMCPFMWFYSLIPCTLPFQNPIP* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00856 435 Gene3D Ribonuclease Inhibitor 99 264 IPR032675 -
Lapu8g00856 435 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 56 416 - -
Lapu8g00856 435 SUPERFAMILY L domain-like 107 393 - -
Lapu8g00856 435 Gene3D Ribonuclease Inhibitor 265 404 IPR032675 -
Lapu8g00856 435 MobiDBLite consensus disorder prediction 37 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00856 Lapu-Chr8 26753384 26754694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00856 78 412 Leucine-rich Repeat extension Gene Families AT3G24480 42.985 5.34e-85 267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00856 8 26753384 26754694 Lapu8g00856 8 26753384 26754694 ECH