Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00838 ATGGAACTCCTAACCGTGGTGGATGATTTTTTTGTCACGGCGTCTCTGGCGCTTCTTCTCACTTTCATCGTCTTGAAGCTCCTCGAAGCCATCAACGACACTCACGCCACACCAAAACGTCACGTCACTCCCCAACCGCTCCCTCATGCGGAACGCTGTATGGTTCAGCCCGCTCAAAGCAAGACCAAGGTCGGTTTTATTACTCCGGTTCACGCTGTAACCAAATGCAGCATAGAAAAGGCTATGGCCGAACCGGCTCCTTATGAGGAACTGTTGACGGTTCACCCCGCTCAAAGTAAGAGTCTAGAAATTGAATGTGAAGAAGCTACGGTCGAACCGATTCCACCGGTTCAGCCCGCTCAAAGTAAGGACACGATCTGTTGTATTAGTCCGTTTCAAGCTGCCACGTGTGCAGATATTTATGGCGAGATAGAAGAGGCTATGGTCGAACCTGTTCCCTCAAGCGAGAGCACGGTTTTATGTCCGGTTCAAGCTGCCACGTCTATAGGAAGCGAACACGAGGTTGAAGAGGTTATGATGGAATTCGATTCCGACGTTGTTCTCGAGTCACCGGTTAAATCACACACAGACATTGCCGTTAAAGAGGAAATCGCTGAGGCTAATGATGGAAAAACTCGAGAGTTTGCTGAGAAGAGGGACGTGGAATGTGTTGAAGATCCTTGCACTGAAATTGAAGTTTCCGGTGTAGAAAACGGTGTAAAAGAGAATGATTACAATGATGATGATGATGATGATTGGGAAGGGATTGAGAGGAGTGAGTTGGAGAAAGAGTTTATGGCGGCTACGGAATTTGTTACTAACGAGGGTGATCGATTGGAGAGTGTCGGAAGCAACTTGAAAATGGAGTTGTATGGGCTTCACAAGGTTGCGACGGAAGGGACTTGCCGTGAACCTCAGCCAATGCCTCTCAAGCTCTCTGCACGTGCCAAGTGGAATGCTTGGCAAAAGCTGGGGAACATGAATCCAGAGGTTGCAATGGAGCAGTATATCAGCCTTCTTTCGGATAAATTTCCTGAATGGATGAAAGATACTATAACTGGAATGAGTGAACATGAACCAACAAAATCTGAAGTTTCTGAGTCTGCTGCTTCTGATTTGAGCACAACTTTGTCTCACCAACAAACGATCTTAAGTGATAGGGAAGAGTCTGATTCCAAGGAGGGTCGTAGCCCACTTACAGAGTCAGTTTAA 1212 0.4703 MELLTVVDDFFVTASLALLLTFIVLKLLEAINDTHATPKRHVTPQPLPHAERCMVQPAQSKTKVGFITPVHAVTKCSIEKAMAEPAPYEELLTVHPAQSKSLEIECEEATVEPIPPVQPAQSKDTICCISPFQAATCADIYGEIEEAMVEPVPSSESTVLCPVQAATSIGSEHEVEEVMMEFDSDVVLESPVKSHTDIAVKEEIAEANDGKTREFAEKRDVECVEDPCTEIEVSGVENGVKENDYNDDDDDDWEGIERSELEKEFMAATEFVTNEGDRLESVGSNLKMELYGLHKVATEGTCREPQPMPLKLSARAKWNAWQKLGNMNPEVAMEQYISLLSDKFPEWMKDTITGMSEHEPTKSEVSESAASDLSTTLSHQQTILSDREESDSKEGRSPLTESV* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00838 403 MobiDBLite consensus disorder prediction 366 383 - -
Lapu8g00838 403 MobiDBLite consensus disorder prediction 357 403 - -
Lapu8g00838 403 SUPERFAMILY Acyl-CoA binding protein 260 348 IPR035984 GO:0000062
Lapu8g00838 403 Pfam Acyl CoA binding protein 262 340 IPR000582 GO:0000062
Lapu8g00838 403 Gene3D - 255 364 IPR014352 -
Lapu8g00838 403 MobiDBLite consensus disorder prediction 384 403 - -
Lapu8g00838 403 PANTHER ACYL-COA-BINDING PROTEIN, ACBP 7 394 - -
Lapu8g00838 403 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 261 349 IPR000582 GO:0000062
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00838 Lapu-Chr8 26537188 26541848 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00838 248 361 Acyl Lipid Metabolism Gene Families AT4G24230 58.621 4.29e-40 144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00838 8 26537188 26541848 Lapu8g00838 8 26537188 26541848 ECH